Clupea harengus (Atlantic herring): 105903145
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Entry
105903145 CDS
T09045
Symbol
rab39bb
Name
(RefSeq) RAB39B, member RAS oncogene family b
KO
K07925
Ras-related protein Rab-39B
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105903145 (rab39bb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105903145 (rab39bb)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
char04031
]
105903145 (rab39bb)
Membrane trafficking [BR:
char04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
105903145 (rab39bb)
GTP-binding proteins [BR:
char04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
105903145 (rab39bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
AAA_22
TniB
Motif
Other DBs
NCBI-GeneID:
105903145
NCBI-ProteinID:
XP_012686311
Ensembl:
ENSCHAG00000012110
UniProt:
A0A6P3W1A3
LinkDB
All DBs
Position
18:19676612..19681211
Genome browser
AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFLL
VGHKCDLEAQRQVSRQEAEKLAVAYGMRYVETSARDAINVERAFTELTRDIFELVKRGDI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatatggctgtaccaattccgactgattgtcatcggtgactccaccgtgggg
aagtcgtgcttgatccgacgcttcaccgaggggcgtttcgctcaggtgtcagatcctact
gtgggggtggacttcttctctcgcctggtggaaatcgaaccgggcaagcgcatcaaactt
caaatctgggacaccgcaggccaggagcgcttcaggtcaatcacccgagcttactaccgc
aactctgtgggcggcctcctgctcttcgacatcaccaaccgtcgctccttccagaacgtg
cacgagtggctcgaagaggcgcgcagccacgtgcagccgcacagcatcgtcttcctgctg
gtgggccacaagtgcgacctggaggcccagcggcaggttagccggcaggaggccgagaag
ctggcggtggcctacggcatgcgctacgtggagacgtcggcgcgcgacgccatcaacgtg
gagagggccttcaccgagctgacgcgcgacatcttcgagctggtcaagcgcggcgacatc
accatccaggagggctgggagggggtgaagagcggctttgtgcccaacgtcgtgcactcc
tctgaagaggtcaccaaaagcgaccgccggtgcctgtgctga
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