Clupea harengus (Atlantic herring): 105903172
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Entry
105903172 CDS
T09045
Name
(RefSeq) histidine ammonia-lyase-like
KO
K01745
histidine ammonia-lyase [EC:
4.3.1.3
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00340
Histidine metabolism
char01100
Metabolic pathways
char04382
Cornified envelope formation
Module
char_M00045
Histidine degradation, histidine => N-formiminoglutamate => glutamate
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09105 Amino acid metabolism
00340 Histidine metabolism
105903172
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
105903172
Enzymes [BR:
char01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.3 histidine ammonia-lyase
105903172
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Gene cluster
GFIT
Motif
Pfam:
Lyase_aromatic
Motif
Other DBs
NCBI-GeneID:
105903172
NCBI-ProteinID:
XP_031414309
Ensembl:
ENSCHAG00000018371
UniProt:
A0A6P8EQU7
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Position
21:complement(6296360..6307415)
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AA seq
620 aa
AA seq
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MSQVSIRVGGEWVVKMCGDGNQTLRKLGQSCAHPSKTKGGADQPSFWVRRCADGALLDLD
KPIGKVLRNNDFVDLVMDGDCWSPPIGPVFACGQTEWKEPTEYIALDGESLTTCDLVRLG
KGLLKIKLTEKAIKKVNDARDVIELIIKENRVVYGINTGFGRFAQTAISNNQLKELQDNL
IRSHSAGVGNPLSPERTRMLLAVRINVLAKGFSGVSMETLQATVAAFNASCLSWVPEQGT
VGACGDLAPLAHLAQGLMGEGLMWSPQSGWADATAVLQGHGLTPITLKAKEGLALINGAQ
MISSLGSEALERAQAIARQADIIAALTLESLKGTPKAFDKDIHASKPQPGQIEVAFRMRS
VLPSDLYSSEITGGSYDRVQDAYTLRCCPQVHGIANDTIDFVKKILTTELNSATDNPLVF
AERGITISGGNFHGEYPAKAMDFLAIGVHELANISERRIERLCNPSLSELPAFLVKEGGI
NSGFMIAHCTAAALVSENKVLCHPSSVDSLSTSAGTEDHVSMGGWAARKALRVVQHVEQV
LAIELLAACQALEFRRPQKTTPPLEQVHKLVRSVVRPWDKDRAMSPDIEAAHKLLLEEKV
WEAVRPYVEKYRQMEQKTAL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggtcagtattcgtgtgggcggtgagtgggtggtgaagatgtgtggcgacggg
aaccaaaccctacggaaattgggacagagttgcgctcatccctctaaaaccaagggtggc
gctgatcagcccagtttctgggtcaggaggtgtgctgatggtgcactgctggatctggac
aagccaatcggaaaagtgctacgcaacaatgacttcgttgaccttgtgatggacggggac
tgctggtcaccaccaattggtcccgtgtttgcttgtgggcaaacagaatggaaggaacca
acagagtacattgccctggatggggaaagcctgaccacgtgcgacctggtccgattggga
aaaggccttctcaagattaagctcacagagaaggctataaagaaagtcaacgatgccagg
gatgtcattgagttaatcatcaaggagaaccgagtcgtctatggaataaacactggcttt
gggaggtttgctcagaccgccatctcaaataatcaactcaaggaacttcaggataacctg
atccgttctcacagtgctggtgtgggtaaccctctgagtcctgaaagaacccgcatgctc
ctcgctgtcaggatcaacgtactggctaaaggattcagcggcgtttccatggaaactctc
caggccacagtagcggccttcaatgcatcctgcctgtcgtgggtgcctgagcagggtacc
gtgggggcgtgtggagacctggctcctcttgcccacctggcacaggggctgatgggagaa
gggctcatgtggtctccacagagcggctgggccgacgccacagcggtgttgcaaggccac
ggtctgactcccatcaccctgaaggctaaagagggcctcgctctgatcaatggggcccag
atgatctcgtctctgggttcggaggccttggagagagctcaggccatcgcccgccaagct
gacatcatcgcagctctcaccctcgagtcgctcaaagggactcccaaagcttttgacaag
gatatccatgcttcgaagcctcagccaggtcagattgaggtggccttccgcatgcgctct
gtgctgccctctgacctctactcctctgagatcacaggggggtcatatgaccgggtccag
gatgcatacacactacgctgctgtcctcaggtgcatggaattgcaaatgacaccattgac
ttcgtcaagaagatcctgaccactgagctcaacagtgctacagacaatccgctggtgttt
gctgagagagggattactatctctggaggaaactttcatggggaatatccagcaaaggct
atggatttcctggctataggggtgcatgagttggccaacatcagtgagcgtcgcattgag
agactgtgcaacccttccctcagtgagctgcctgcattcctggtcaaagagggcggcatc
aactctggcttcatgattgcacactgtaccgctgcagcactagtttcagagaataaggtg
ctgtgtcacccctcctctgtggactctctgtccaccagcgcaggcacagaggaccatgtc
tccatgggggggtgggcagcacgcaaggccctcagagtagtgcagcacgtggagcaggtg
ttggccattgagctgctggctgcctgtcaggccctggagttccgtcgccctcagaagacc
acaccccccctggagcaggtgcacaagttggtccggtctgtagtcaggccttgggacaag
gatcgagccatgagccctgacattgaagctgcacacaagctcctgttggaggaaaaggtg
tgggaggctgtgaggccatatgtggagaagtacaggcagatggaacagaagacagctctg
tga
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