Clupea harengus (Atlantic herring): 105903209
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Entry
105903209 CDS
T09045
Name
(RefSeq) high affinity cationic amino acid transporter 1-like isoform X2
KO
K13863
solute carrier family 7 (cationic amino acid transporter), member 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105903209
Transporters [BR:
char02000
]
Solute carrier family (SLC)
SLC7: Cationic amino acid transporter/glycoprotein-associated
105903209
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AA_permease_2
AA_permease
AA_permease_C
Motif
Other DBs
NCBI-GeneID:
105903209
NCBI-ProteinID:
XP_012686374
Ensembl:
ENSCHAG00000000738
UniProt:
A0A6P3W1C9
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Position
9:complement(1637941..1653801)
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AA seq
654 aa
AA seq
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MFLSTLKDLGRQLLRVKVVDCSATESRLARCLNTFDLVALGVGSTLGAGVYVLAGAVARE
NSGPAIVLSFLIAALASVMAGLCYAEFGARVPKTGSAYLYSYVTVGELWAFITGWNLILS
YIIGTSSVARAWSATFDGLIGNHIEKFCKQYMNMKAEGILAEYPDMFAVLIIITLTGLLA
FGVKESAMVNKVFTCVNVLVLLFVVVSGLVKGTLKNWNIDPEEVLHYNGSGTYNLSETLP
TPAEVGAGGFMPFGVKGVLSGAATCFYAFVGFDCIATTGEEVKNPQRAIPIGIVASLLIC
FLAYFGVSAALTMMMPYYLLDKNSPLPLAFTYVGWNGATYAVAVGSLCALSTSLLGSMFP
LPRIIYAMARDGLLFSFLARVSERKTPMVATAASGFMSAIMAFLFDLKALVDLMSIGTLL
AYTLVAACVLVLRYQPNQPSCVLPYQAASQEEAEMEADSNMESNSGFLPAQERFCMQNVL
FPKNTEPSRLSGSVVNIATSVLGLLVCVFCVVAAQETVLAIWSLLLLVVLAVVCLLITVV
IGRQPQSKTKLSFKVPLLPVLPVVSMFINVYLMMQLGRGTWIRFVIWMILGFIIYFGYGI
WNSTEAALAKSNATADITSFKDLMNGHATTPEKTAFLGKGADAQGEEEEEDSDP
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgagcacgctaaaggaccttgggcggcagctgctgcgggtgaaagtggtggac
tgtagtgccaccgagtcgcgactggcacgctgcctcaacacctttgacctggtggccctg
ggcgtgggcagcacgctgggtgccggggtgtacgtcctggccggcgccgtggcacgggag
aactcgggccccgccatcgtgctgtccttcctgatcgccgctctggcgtccgtcatggcg
ggcctttgctacgccgagtttggggcgcgggtgcccaagaccggctcggcttatctgtac
agctatgtgactgtgggggagctttgggccttcatcaccggctggaacctcatcctctct
tacatcatcgggacatctagcgtggcccgagcctggagcgctacgtttgatggcctgatt
gggaaccacattgagaagttctgtaagcagtacatgaatatgaaggctgagggaatactg
gccgagtatccagatatgttcgccgtacttatcatcatcactttaactggtttgcttgct
tttggggtaaaggagtcggccatggtcaacaaggtgttcacctgcgtcaacgtgctggtg
ctgctctttgtggtcgtgtcaggcctggtcaagggaaccttgaagaactggaacattgat
cctgaagaagtactccattataatggcagtggcacatataatctcagtgagacattgcca
acaccggcggaggttggcgcaggtggcttcatgcctttcggggtcaaaggggtcctctct
ggcgctgccacctgcttctatgcctttgtgggcttcgactgcatagccactactggagag
gaggtgaagaacccacagagggccatccccatcggtatcgtggcctccctgctcatctgt
ttcctggcctacttcggggtgtcggccgccctcaccatgatgatgccctactacctgctg
gacaagaacagccctctgcctctggccttcacatacgtcggctggaacggtgccacctat
gcggtggccgtagggtctctgtgtgccctctccaccagtctcctaggctccatgttcccc
ctgccgcgcattatctatgccatggcgcgggacggcctgctcttctcgtttctggccaga
gtcagcgagagaaagacgcccatggtcgccaccgcggcgtcagggtttatgtccgctatc
atggcgttcctgtttgacctgaaggccctggtggacctcatgtccattggcactctgttg
gcgtacacgttggtggcagcctgtgtcctggtgctcaggtaccagccaaatcagcccagc
tgtgttctgccctaccaggctgcttcccaggaagaggcagagatggaggccgactccaac
atggagtccaactcggggttcctgcctgcgcaggaacgcttctgtatgcagaacgttctc
tttccaaagaacacggaaccgtctcgtctctccggctctgtggttaacatcgccaccagt
gtgctaggcctcctggtgtgtgtgttctgtgtggttgctgcccaggaaaccgtgctggca
atctggtccctgctgctcctcgtagtcctggcagtggtgtgtctgctcatcaccgtggtg
attggaagacaaccacagagcaaaaccaagctctcctttaaggtgccccttttgcctgtc
ctgcccgtcgtcagcatgttcatcaacgtctacctcatgatgcagctgggccgcggcacc
tggattaggttcgtcatctggatgattctgggattcattatttactttggctacggcatt
tggaacagcacagaagctgccctggcaaagtccaatgcaaccgctgatatcacgagcttc
aaggacctgatgaacggccatgccacgactccagagaagacggcctttctcggcaaagga
gctgacgctcaaggcgaagaagaagaagaagatagcgatccttaa
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