Clupea harengus (Atlantic herring): 105903218
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Entry
105903218 CDS
T09045
Symbol
cldn8.1
Name
(RefSeq) claudin-8
KO
K06087
claudin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03272
Virion - Hepatitis viruses
char04382
Cornified envelope formation
char04514
Cell adhesion molecule (CAM) interaction
char04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
105903218 (cldn8.1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
105903218 (cldn8.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105903218 (cldn8.1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
105903218 (cldn8.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
105903218 (cldn8.1)
04147 Exosome [BR:
char04147
]
105903218 (cldn8.1)
Cilium and associated proteins [BR:
char03037
]
Other cilia and associated proteins
Stereociliary proteins
105903218 (cldn8.1)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
105903218 (cldn8.1)
Exosomal proteins of colorectal cancer cells
105903218 (cldn8.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF5360
Motif
Other DBs
NCBI-GeneID:
105903218
NCBI-ProteinID:
XP_031429988
UniProt:
A0A6P8FP97
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All DBs
Position
9:complement(2019844..2022729)
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AA seq
314 aa
AA seq
DB search
MANGGLEIGALCLTLIGLIGCGASTGMPQWRVTAFIGENIIVMESRYEGLWMNCFRQADI
RMQCKVYDSLLALSPDLQAARGLMCCAVALGGLGLLVSIMGMQCTGCIRDNDSAKRMVLI
VAGSMVICSGICCIIPVSWTGHAIIRDFYNPLLLDAQRRELGEALYIGWVAGAFLFAGGC
VFLCTSAPRDDEDPRKPQYQWSGPPMSYTPQPLLPAALVPRQQSMYSYPSQQPSVQYSRQ
PSVEYSRQPPVQFSTQPSMQFSRQPSVQYPKQHPVQFSRQPSFQQSSQSSMQPSRQPSLQ
PVRYPSIHSKVAYL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggccaacggggggctggagatcggggcactgtgcctgacgctcatcggcctcatcggc
tgcggggccagcacgggcatgccgcagtggcgcgtgacggcctttattggcgagaacatc
atcgtcatggagtcgcgctacgagggtctgtggatgaactgctttcggcaggcagatatc
cgcatgcaatgcaaggtgtacgactcgctgctggcgctgtcccccgacctccaggcggcc
cgcgggctcatgtgctgcgcagttgcgctgggcggcctgggcctcctcgtcagcatcatg
ggcatgcagtgtacgggctgcatccgtgacaacgacagcgccaagcgcatggtgctcatc
gtcgccggctccatggtgatctgctcaggcatctgctgcatcatccccgtctcgtggacg
ggtcacgccatcatccgcgacttctacaacccgcttctgctcgacgcgcagcgccgcgag
ctcggcgaggcgctctacatcggctgggtggcgggggcctttctgtttgccggcggctgc
gtgtttctgtgtaccagcgcgccgcgcgacgacgaggaccctcggaagccccagtaccaa
tggagcgggccccctatgtcctacacaccgcagccactgctgcccgcggcactagtcccc
aggcaacagtccatgtacagctacccgtcccagcagccctccgtgcagtactccagacag
ccctctgtggagtactccagacagccccccgtgcagttctcaacacagccctccatgcag
ttctccagacagccgtctgtgcagtaccccaaacagcaccccgtgcagttctccagacag
ccctcatttcagcagtctagccagtcatccatgcaaccatccaggcagccgtctctgcag
cctgtcaggtatccgtctatccacagcaaagttgcctatctgtag
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