Clupea harengus (Atlantic herring): 105903274
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Entry
105903274 CDS
T09045
Name
(RefSeq) keratin, type II cytoskeletal 8-like
KO
K07605
type II keratin, basic
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04382
Cornified envelope formation
char04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
105903274
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
105903274
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105903274
04147 Exosome [BR:
char04147
]
105903274
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
105903274
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
105903274
Exosomal proteins of other body fluids (saliva and urine)
105903274
Exosomal proteins of colorectal cancer cells
105903274
Exosomal proteins of bladder cancer cells
105903274
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Keratin_2_head
TPR_MLP1_2
CENP-F_leu_zip
CCDC39
FKBP15
ADIP
FPP
T4SS_LegC2C7
CCDC89
HH_AprE
AAA_13
Sec10_N
COG6_N
ACBP4_C
STB2_C
TolA_bind_tri
ODF2_C
Motif
Other DBs
NCBI-GeneID:
105903274
NCBI-ProteinID:
XP_012686453
Ensembl:
ENSCHAG00000004593
UniProt:
A0A6P3W2K2
LinkDB
All DBs
Position
4:4607498..4612462
Genome browser
AA seq
569 aa
AA seq
DB search
MSVKISSSSYSIGGGGGSMSGGFSSGGGGGYSSGGSVRRSFSSQSAMAGGGGGGARMSSV
SMRRSIGGGGMGGGGGGGGFGYSLSSGGGGGGFGSGFGSGGGGGGFGLGMGGGGGGGFGL
GMGGGGGGCIPPTITAVTVNQSLLAPLNLEIDPTIQTVRTQEKNQIMTLNNRFASFIDKV
RFLEQQNKMLETKWSLLQDQTTVRSNIDSMFEAYIGNLRRQLDGLGNEKVKLEGELRNMQ
GLVEDFKMKYEDEINKRASVENEFVLLKKDVDAAYMTKVELEAKVDALQDEINFLRAIYE
EELRELQGQIKDTSAIVEMDNSRTLDMDSIVAEVRAQYEDIANRSRAEAETWYKAKFEEM
QSSAGRYGDDLRTTKAEISELTRMISRLQNEIESVKGQRANLEAQIAEAEERGEMAVKDA
KLRIRDLEEALQRAKQDMARQVREYQELMNVKLALDIEIATYRKLLEGEESRISSGGASA
TVHIQESSGGGGGGMSLGGGGGGGYGYGGGSGMSMSYGGGGGGGMGMSYGGGGGMSMGMS
GGGGSSIGGGGSSISMSRSSTVSSGMRRY
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaaagatctcctcatccagctatagcatcggcggtggtggtggcagcatgagt
ggcggcttcagcagcggtggcggtggcggctacagcagcggtggcagcgtgaggaggagc
ttctccagccagtccgccatggcaggcggcggcggcggcggtgcccgcatgagctccgtg
tccatgaggcgctccatcggcggcggtggcatgggaggcggtggtggtggtggtggcttc
ggctacagcctgagcagtggtggtggtggtggcggcttcggcagcggcttcggttccggc
ggaggtggtggtggcttcggactgggaatgggtggcggaggtggtggtggcttcggactg
ggcatgggaggtggaggtggtggttgcataccaccaaccatcacagctgtcaccgtcaac
cagagtctgctcgcccccctgaacctggagatcgaccccaccattcagaccgtccgcact
caggagaagaaccagatcatgaccctcaacaaccgcttcgcctccttcatcgacaaggtg
cgcttcctggaacagcagaacaagatgctggagaccaagtggagcctcctccaggaccag
accaccgtgcgctccaacatcgactccatgtttgaggcctacattggcaacctgcgcaga
cagctcgacggcctgggaaatgagaaggtcaaactggagggagagttgagaaacatgcag
ggtctggttgaggacttcaaaatgaagtatgaggatgaaattaacaagcgtgcctcagtg
gagaatgagtttgttctgctcaagaaggatgttgatgctgcctacatgaccaaggtagaa
ctggaggccaaggttgatgcccttcaggatgaaatcaacttcctcagggccatctatgaa
gaggagctgcgcgagctgcagggccagatcaaggacacctctgctattgtggagatggac
aacagccgaactctggacatggactccattgtggctgaagtgcgtgctcagtacgaggac
atcgccaaccgcagccgggccgaggcagagacgtggtacaaggccaagtttgaggagatg
cagtcctctgctggcagatacggtgatgacctgcgcacaaccaaggcagagatctctgag
ctcacccgaatgatcagccgcctccagaatgaaattgaatcagtcaaaggacagcgtgcc
aaccttgaggcccagattgcagaggctgaggaacgtggagagatggcagtgaaggatgcc
aagctgcgcatcagggaccttgaggaggccctccagagagccaagcaggacatggcccgc
caggtgcgcgagtaccaggagctgatgaacgtcaaactggccctcgacattgagatcgcc
acctacaggaaactgctggaaggagaggagtccagaatctcttctggtggtgcctctgca
acagttcacatccaggaatcctctggtggtggaggcggtggcatgtcccttggcggaggc
ggaggcggtggatacggctatggtggcggctctggcatgagcatgtcctacggcggcggc
ggcggtggcggcatgggcatgtcctacggcggcggcggcggcatgagcatgggaatgagc
gggggcggcggctcaagcattggcggtggcggcagcagcatttccatgtctcgctcctct
acggtgtccagtggcatgcgtcgctattaa
DBGET
integrated database retrieval system
