Clupea harengus (Atlantic herring): 105903320
Help
Entry
105903320 CDS
T09045
Symbol
ppp2r2d
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03015
mRNA surveillance pathway
char04261
Adrenergic signaling in cardiomyocytes
char04382
Cornified envelope formation
char04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105903320 (ppp2r2d)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105903320 (ppp2r2d)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
105903320 (ppp2r2d)
09158 Development and regeneration
04382 Cornified envelope formation
105903320 (ppp2r2d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105903320 (ppp2r2d)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105903320 (ppp2r2d)
03036 Chromosome and associated proteins [BR:
char03036
]
105903320 (ppp2r2d)
Protein phosphatases and associated proteins [BR:
char01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
105903320 (ppp2r2d)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
105903320 (ppp2r2d)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
105903320 (ppp2r2d)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
DSE1_N
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Y_phosphatase2
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
105903320
NCBI-ProteinID:
XP_012686505
Ensembl:
ENSCHAG00000013972
UniProt:
A0A6P3W0V1
LinkDB
All DBs
Position
23
Genome browser
AA seq
447 aa
AA seq
DB search
MAGVGGGNDFQWCFSQVKGAIDEDVAEADIISTVEFNYTGDLLATGDKGGRVVIFQREQE
SKNRPLSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIK
LWKISERDKRAEGYNLKDEDGRLRDPFRITSLRVPVLMPMDLMVEASPRRIFANAHTYHI
NSISVNSDHETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAECHPHQCN
VFVYSSSKGTIRLCDMRAGALCDRHSKFFEEPEDPSSRSFFSEIISSISDVKFSHSGRYM
MTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSAIMTG
SYNNFFRMFDRNTRRDITLEASRENSKPRAILKPRKVCTGGKRKKDEISVDSLDFNKKIL
HTAWHPKENVIAVAATNNLYIFQDKIN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgtcggaggagggaacgatttccagtggtgtttctctcaagtgaaaggagcg
atagacgaggatgtggcggaagcggacattatctcaactgttgaattcaactatacgggt
gacctattagccacaggagacaaagggggaagagttgtcatatttcagcgagaacaggag
agtaaaaaccgaccactctcccgaggagaatacaatgtgtacagcactttccagagtcac
gagccagagtttgactatttgaaaagcttagaaattgaggagaaaatcaacaaaatccga
tggctaccccaacagaatgctgctcactttctgctttccacaaatgacaaaaccataaag
ttatggaaaatcagtgaaagggacaaaagagcagagggctacaaccttaaagatgaagat
gggagactgcgggatcctttccgaatcacatcactacgggtgccagtcttgatgcccatg
gacctgatggtggaggcgagcccacggagaatatttgcaaacgcacacacatatcacatc
aattccatttcagtaaatagcgatcatgaaacgtacctttctgcagatgacctaagaata
aacctatggcacttagaaatcacagatagaagttttaacattgtagatataaagcctgcc
aacatggaggagttgacggaggtcatcactgcagccgagtgccaccctcaccagtgcaat
gtatttgtgtacagtagtagcaagggcactatccgcctgtgtgatatgcgagcgggcgcc
ctctgcgatagacatagcaaattttttgaggagccagaggacccaagcagcaggtctttc
ttctcggaaatcatctcctcaatatcagatgtgaagttcagtcacagtggacgctacatg
atgacccgggactatctctcagtaaaggtgtgggacctcaacatggagaacaggccagtg
gagacgtaccaggttcacgaatacctccgaagcaagctgtgctcgctgtatgagaatgac
tgcatctttgacaagtttgagtgctgctggaacggttctgacagtgccatcatgactggc
tcctataacaacttcttcaggatgttcgacaggaacacccggcgagacatcacgctggaa
gcgtcccgggagaacagtaaaccgcgtgccattctgaagccccggaaggtgtgtaccggc
ggcaagaggaagaaggacgagatcagtgtggacagcctggacttcaacaagaagatcctg
cacaccgcatggcaccccaaggagaacgtcatcgccgtggccgccaccaacaacctgtat
atattccaggacaaaatcaactaa
DBGET
integrated database retrieval system
