Clupea harengus (Atlantic herring): 105903350
Help
Entry
105903350 CDS
T09045
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 3 isoform X1
KO
K08628
a disintegrin and metalloproteinase with thrombospondin motifs 14 [EC:3.4.24.-]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105903350
Peptidases and inhibitors [BR:
char01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
105903350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
Reprolysin
TSP_1
ADAMTS_CR_2
ADAMTS_spacer1
Pep_M12B_propep
Reprolysin_5
Reprolysin_3
Reprolysin_2
TSP1_spondin
ADAMTS_CR_3
Reprolysin_4
TSP1_CCN
PLAC
Peptidase_M10
DUF4953
Motif
Other DBs
NCBI-GeneID:
105903350
NCBI-ProteinID:
XP_031416664
Ensembl:
ENSCHAG00000023991
UniProt:
A0A6P8EWJ2
LinkDB
All DBs
Position
23:complement(915709..982225)
Genome browser
AA seq
1248 aa
AA seq
DB search
MDYIYFLVYCTISVLFLDYRHAAYAHANLSGKLSEYGLIVPFSTDSQGRYISHVVSVTAG
SKIGVSSAGKRRVSRSAPSSTFTSNSQQLFFNVTVFGKELHLRLSANRRLVAPGAFVEWQ
EDFEEKAKERIHGNCVFTGDVTDMPDASVAISNCDGLAGLIRTDNEEFFIEPLEKGQQEV
EIKGRVHVVYRRSAIKKEPSQRKEDLHNEVAAFATAELPNALDAVEQKLSESERKRRHAK
KDDYNIEVLLAVDDSVVRFHGKEHVQNYVLTLMNIVDEIYHDESLGTNINVVLVRIIMVG
YRQSISLIERGNPSRSLEQVCRWANTQQRLDPNHAEYHDHAIFLTRQDFGPAGMQGYAPV
TGMCHPLRSCTLNHEDGFSSAFVVAHETGHVLGMEHDGQGNRCADETSMGSIMAPLVQAA
FHRYHWSRCSKQELNRYIHSYDCLLDDPFEHKWPKLPELPGINYSMDEQCRFDFGVGYKM
CTAFRTYDPCKQLWCSHPDNQYFCKTKKGPPVDGTECAPGKWCFKGHCIWRSSQEPFGHD
GGWSSWNKFGSCSRTCGGGVRSRNRQCNNPPPAYGGRDCPGSSFDYQMCNTEDCPGPYED
FRAQQCIQRSNKYHNNVKHTWLPYEHPDEAHKCELSCRSKETGEAVFMNQVMHDGTRCSY
TDAFSICARGECLNVGCDKEVGSYKQEDKCGVCGGDNSHCRTVKLTLTKTPKKTGMLKVF
DIPVGARHILIEENETSPHIIAVKNQVTGNFILNSKGEEVKSKTFIEDGLEWEYSVGTGK
EALKTIGPLHEGIVVLVVPQQEEAKISLTYTYIIHEDLVPVITNNNVLLAELDTYEWALK
SWSQCSKPCGGGVQYTKYGCRRKSDSRLVHRNFCELGKKPKPIRKRCNVQDCSQPKWVIE
EWGQCSKTCGKLGYQSRVVTCTQALNNGTSRSVHTKYCTEERPESRRACNISACPAPWRT
GAWSQCSVTCGEGIQQRQVVCRATDNSSGQCEGDKPETVLICKLAPCPGQPSLPSPTAST
VENGTTSDSDAETENPINKISNEPCLGDKSIFCQMEVLARYCSIPGYNKLCCESCSKKVN
GAADTTTAAPNLDTAIPDPRHATSAPTHSSTIVPTPDATTALVFSSTAAPARTTKATARR
PRATVQGQTPPPPSPQMASVAPSEDVTPPPSPLELPTSQSKAQAQAHGPSSGPPLPLDPS
GLQIQSTPHPSGEDGNSTLGTQEASGRSRRDSVGSERPLTQRTLPVET
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggattatatttattttctggtgtactgcacaatcagtgtattatttttggactacaga
cacgctgcatacgctcatgccaatctctctggaaagttaagtgaatacgggctcatcgta
ccgttcagcacggactctcaaggccggtatatctctcacgtggtgtcggtcacagctgga
agtaaaattggcgtttcgtccgctggaaaacggcgcgtctcccgcagcgccccgagttcc
acgttcacctcgaatagtcaacagttgtttttcaacgtcactgtctttggtaaggagttg
cacttgcgcctcagcgccaacagaaggcttgttgctccaggtgcctttgtggaatggcaa
gaggacttcgaggaaaaggccaaggagcgtattcatggcaactgtgtttttaccggggat
gttaccgatatgccggatgcctcggtggcaattagtaactgtgatggactggcaggcctc
attcgcactgataatgaggagttcttcatcgagcccctggagaagggccagcaggaggtg
gagataaaaggccgcgtccacgtggtgtaccgcaggtccgccatcaagaaagagcccagc
caacgcaaggaggacctccacaacgaagtggctgcgtttgccactgccgagctgcccaac
gccctggacgcggtggagcagaagctgagcgagtccgagcgcaagcggcgacacgccaag
aaggacgactacaacatcgaggtcctgctggctgtggacgactccgtggtgcgcttccat
gggaaagagcacgtccagaactacgtcttaaccctcatgaacattgtagatgaaatttac
catgatgaatccctgggaaccaacatcaatgtggtcctcgtacgaatcataatggttggc
tacagacagtccatcagtctgatcgagcgcgggaacccgtctcggagccttgagcaggta
tgccgctgggccaacacccagcagcgtctggaccctaaccacgccgagtaccacgaccat
gccatcttcctgaccaggcaagattttggtcccgcaggtatgcaaggttacgccccagtg
acgggcatgtgccacccactgaggagctgcacgctcaaccacgaggacggcttctcctct
gcgttcgtggtggctcatgagactggacatgtgttggggatggaacatgatggccaggga
aaccgctgtgcagatgagaccagtatgggcagcattatggcaccgctggtgcaggctgcc
tttcaccgctaccactggtcacgctgcagcaaacaggaactcaaccgatacatccactcc
tatgactgcttgctggacgacccctttgagcacaagtggcccaagcttccggagcttccg
gggatcaactactccatggacgaacagtgtcgctttgattttggggtcgggtacaagatg
tgcaccgcattccgtacctatgacccatgcaaacagctgtggtgcagtcaccctgacaat
cagtacttctgcaagaccaagaagggaccccctgtggatggcacagaatgtgctcccggg
aagtggtgcttcaagggccactgtatctggaggtcatcccaagagccctttggtcatgat
ggaggctggagctcctggaacaagttcgggtcgtgctcgcgcacctgtggtggaggggtg
cgctcccgcaacagacagtgcaacaatcctcctcctgcatacggtggccgtgactgccca
ggctcatccttcgactaccagatgtgcaacacggaggattgcccgggcccctacgaggac
ttccgggcccagcagtgcatccagcgcagcaacaaataccacaacaacgtcaagcacacc
tggctgccttacgagcatccggatgaggcccataagtgtgagctgagctgtcgatctaag
gagacgggtgaggcggtgttcatgaaccaggtgatgcatgatggaacgcgctgcagctac
accgacgccttcagcatctgcgcccgtggggagtgtttgaacgtgggctgtgacaaagag
gtgggctcctacaaacaggaagacaagtgtggcgtgtgcggcggggacaactctcactgt
cgtaccgtcaagctaacgctgaccaaaacccccaagaaaacaggtatgctgaaagtgttt
gacatcccagtgggggcgcgccacatcctgatcgaagagaacgagacttccccacacata
attgctgtaaagaatcaggtgacgggcaacttcattctgaactcaaagggtgaggaggtt
aagtccaaaacattcatcgaggatggactcgagtgggagtattcagttggaaccggcaag
gaggccttgaaaaccatcggccccctccatgaaggcatcgtcgtgcttgtggtaccgcag
caggaggaggctaaaattagcttgacctacacgtacatcatccacgaggacctggtgccc
gtcatcaccaacaataatgtgctgctggccgaactggacacctatgaatgggcactgaag
agctggtcacagtgctccaaaccctgtggaggaggtgtccagtacactaagtatggctgc
aggaggaagagtgacagccgcctggtgcaccgcaacttctgcgagctggggaagaagccc
aagcctatacggaagcgctgcaatgttcaggactgctcgcagcctaagtgggtgattgag
gagtggggccagtgcagtaagacgtgtgggaagctgggttaccagtctcgggtggtgacg
tgcacgcaggccctgaacaacggcaccagccgcagcgtccacaccaagtactgcacagag
gagcggcccgagtcacgccgcgcctgcaacatctccgcctgccccgccccgtggaggacc
ggtgcctggtcacagtgctcggtaacctgtggtgagggcatccagcaaaggcaggttgtt
tgccgcgccacggacaacagcagtggacagtgtgagggggacaagccagaaaccgtcctc
atctgcaaactagccccatgtccaggtcagccttcacttccctcacccacagcttctaca
gtggagaatgggaccacgagtgactcagatgctgagactgaaaaccccatcaacaaaatc
tccaacgaaccgtgcttgggcgacaagtccatattctgccagatggaagtgctagcacgc
tactgctccatccccggctacaacaagctgtgctgcgagtcctgcagcaagaaggtgaac
ggcgctgccgacaccaccactgcagcgcccaacctggacaccgccatcccggatccacgg
cacgccacgagcgcccccacccattccagcaccattgtccccaccccggacgccaccacc
gccctggtcttcagctccacggcggccccggcgcggaccaccaaggccactgcgaggaga
ccgcgtgccacggtacaaggccagaccccgccacctcccagcccacagatggcatccgtc
gcccccagtgaagacgttactcctcctccctctcccctggagctccccaccagtcaaagc
aaggcccaagcccaggcccatggccccagctctgggccccctctacctctggaccccagt
ggactccaaatccagtccaccccccatcccagtggagaggatggcaacagcactttaggc
acccaggaggccagcgggaggtcaagaagagacagtgtgggatcggagaggcccctgacc
caaaggaccttgccagtggagacctga
DBGET
integrated database retrieval system
