Clupea harengus (Atlantic herring): 105903374
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Entry
105903374 CDS
T09045
Symbol
sec31b
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105903374 (sec31b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105903374 (sec31b)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
char02044
]
105903374 (sec31b)
Membrane trafficking [BR:
char04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
105903374 (sec31b)
Secretion system [BR:
char02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
105903374 (sec31b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
EIF3I
TPR_Sec16
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_HPS5
MukF_M
Prp18
Beta-prop_DCAF4
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
105903374
NCBI-ProteinID:
XP_012686576
Ensembl:
ENSCHAG00000024781
UniProt:
A0A6P3W0X7
LinkDB
All DBs
Position
23:complement(1230508..1248295)
Genome browser
AA seq
1226 aa
AA seq
DB search
MRLKEILRTATQAWSPAAHHPAFLALGTSAQQLDASFNTTAVLEIFEMDFADPSVEMKLR
GTLATSNRFHSLIWGNFGLGTDGSAGRLVGGGENGTITVYNPDVILASGEDVIVGQATKH
TGPVRALDYNPFQSNLLASGANDSEIYIWDLNNFSNPMTPGAKSQINEPAEDVSVVAWNR
QVQHILASASPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPEVATQLILASEDDRL
PVIQMWDLRFATSPLKVLENHTRGILSISWSQADAELLLSSAKDNRILCWNPATGEVIYE
LPTINQWCFDVQWCPRNPALLSAASFDGHICVYSVMGGNLEAVQHSSVDKISASFDAMDP
FGTGQVLPPLQMPQSPTQQATIVPPLRKPPKWVRRPVGARFAFGGKLVTFESPKALQQPG
PQLTPRQVFVSQVTTETEFLQRSRDLQAALQSGSFSSYCQAKVQNAPSDCEQDVWKFLMV
NFEDEARVKFLKLLGFSKDELDKKISTCLGKSLQPNGHGVDANDLAEKMQVLSAERSSES
PAAASPRSDSPADFFSQMPKEKPSFQIPVSADKDGLISQALLVGNFEGAVELCLSDGRYA
EAILLSISGGEALLKKTQQRYLERQKNSVSMLISSVVTQNWQDIVQSCELDNWKEALAAL
LTYAHPEEFAPLCDTLGSRLEAGGTEKNRLQACLCYICSVNIEKLVECWAQQRDSSSPLV
LEDLVEKVMILRKSIERLRNGEVSVQSPVLAEKLTHYASLLASQGSLATAMSYLPDSSDQ
AIIQMLRDRLFHAQGMGAQGQPSPKPSVGSARQGPAAAPAPAPAPAQIPTQNAPKQQQQV
PFQPSMPSRMQDAGLPPMPRTLAPQAPDAMAPPPGSHAAPSGMLSRPGQRPMYPQQVNPA
PGFPPSQPFHPQNVPISAPLGFMSGPQVPPSSSSSAGGLPMMPNPVGPPPAGFLPPSSSV
PSTPPTMPPNVLPGAPVPMYPGGPHGQGGMPPPMPGVSYPPMGAGYPQGGPGAPASRPVS
APTVAPPPTGYFPWLSSPLEDEAQEGWNDPPAVRGGPRKKKFPENYTPMAPITAPVMGYP
VEAPLPQDRVQVPPGAPQEPSVQLLAQLPAERVEQKEIPAEHMVLKNTFDSLVQRCQLAA
GDPQTKRKLEDAAKRLAHLYDKLRDQALSPSILGGLHEICRGVAARNYQHGLEVHTQIVS
SSNFSEISAFMPILKVVMTIANKLAV
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgaaggagattctacggacggctacccaggcatggagtcctgcagctcatcat
cctgcgttcttggccttaggtacctctgctcagcagctagatgcctctttcaacactact
gctgtcctagagatcttcgagatggattttgcagatccatctgtggagatgaagctcaga
ggaacccttgcaacctctaacaggtttcacagtctgatctgggggaactttggcctggga
acagatggctctgcgggtaggctcgtgggaggaggtgaaaacggcacaatcacagtgtac
aacccagacgtcattttagcctcaggagaagatgtcattgttggccaggccaccaaacac
acaggtccagtgagagcactggactacaatcctttccaaagtaatcttctggcgtctggg
gcaaatgattctgagatatatatctgggacttgaacaatttcagcaatcctatgacaccg
ggagcaaaatcacagataaacgagccggctgaagatgtcagtgttgtggcgtggaacagg
caggttcagcacatcctggcatcagccagtcccagcggcaaagccgttgtctgggacctg
aggaagaacgagccaatcatcaagattagcgaccacagcaacaggatgcactgctctggg
atgctgtggcacccagaggtggccactcagctgattctggcctccgaagatgaccggctt
cccgtcattcagatgtgggacctgcgcttcgccacgtctccccttaaagtcctagagaat
cacacaaggggaattctctccatatcctggagccaggctgacgcagagctgcttctcagc
agcgccaaagacaacaggatcctctgctggaaccccgccactggagaggtaatctatgag
ctgcctactatcaaccagtggtgctttgacgtccagtggtgccccaggaatccagccctg
ctgtccgccgcttcgtttgatgggcacatctgcgtctattcagtcatgggaggcaacctg
gaagctgtgcaacacagcagtgtggataagatatcagcatcgtttgatgccatggacccc
tttgggacgggccaggtccttccacccctgcagatgccccagtcccccacccaacaggcc
accatcgtccccccgctccgaaagcctcccaagtgggtgcgccgtccagttggagctcgc
tttgcttttggggggaagctggtgaccttcgagagccccaaggccctccagcagccgggc
ccccagctcaccccgcggcaggtgtttgtcagccaggtcaccacggagacggaattcctc
cagcgttcccgggatctgcaggcggctctccagtcaggctccttctccagctactgccag
gccaaagtccagaacgccccctccgactgcgagcaagacgtctggaagttcctcatggtc
aactttgaagatgaagcccgtgtgaagttcctgaagctgttaggatttagtaaagatgaa
ttggacaaaaagatttccacatgtttagggaagagccttcagccaaatggacatggtgtg
gacgctaatgacctggctgagaagatgcaggtcctctctgcagagagatcaagtgagtct
cctgcagccgccagtccacgctcagactccccagccgacttcttcagccagatgcccaaa
gagaaacctagcttccaaatccccgtctctgcagacaaagacggcctgatcagccaggct
ctgctggtggggaacttcgagggggccgtggagctgtgcctgagcgacggccgctacgcc
gaggccatcctgctgtccatcagcggcggggaggcgctactcaagaagacccaacagaga
tacctggagcgccagaagaacagcgtctccatgctcatctcctcagtggtgacgcagaac
tggcaggacatcgtgcagagctgtgagctggacaactggaaggaggccctggccgcgctc
ctgacctacgctcaccccgaggagttcgccccactctgtgacacgctgggctctcgtctg
gaggccggaggcacggagaagaaccggctgcaggcctgcctgtgctacatctgctccgtg
aacatcgagaagctggtggagtgctgggcccagcagagggactcctcctcgccactggtc
ctggaggatctggtggagaaggtgatgatcctgcggaagtccatcgagcgcctgcggaac
ggggaggtgtccgtgcagagccccgtcctggcggagaagctcacccactacgccagcctg
ctggcctcgcagggcagcctggccaccgccatgagctacctccccgacagctcggaccag
gccatcatccagatgctccgggacaggctgttccacgcccaggggatgggtgcccagggt
cagccctcccccaaaccctcagtgggcagtgccaggcagggccctgcagctgcgcccgct
cctgctccagctccggcccaaattcccacccaaaacgcacccaaacagcaacagcaggta
ccattccagccctccatgccctcacggatgcaagacgccggactccccccgatgccccgc
accttagccccacaggctcccgacgccatggccccgccacccggctcccacgccgccccc
tcgggcatgttgtcccggccgggccagaggcccatgtaccctcaacaagtaaaccccgcc
ccagggttccctccctctcagccattccatcctcagaacgtgcccatcagcgctcctctg
ggcttcatgtctggccctcaggtgcccccgtcgtcctcctcgtccgcgggcggcctgccc
atgatgcccaaccccgtagggccacccccggccggcttcctgcccccctcgtcgtcggtc
ccctccacgcctccgacaatgccacccaatgtcctgccaggggcgcccgtgcctatgtac
ccaggaggccctcacggccagggggggatgcctccccctatgcccggtgtctcctaccca
cccatgggggcaggctaccctcagggaggaccaggggcgccggcatccaggccggttagt
gccccaacggtagccccccctccgacaggttattttccgtggctgagctcccctcttgag
gatgaagctcaagagggctggaacgaccctccagccgtgaggggtggtcccaggaagaag
aagtttcctgagaactacactcccatggcccccatcacagccccggtcatgggctacccc
gtagaggcccctctgcctcaggaccgtgtgcaggtcccccccggggccccccaggagcca
agtgtgcagctcctggcgcagctgcctgccgagcgcgtggagcagaaagagatccctgct
gagcacatggtcctcaagaacaccttcgacagcctggtacagagatgccagctggctgca
ggagacccgcaaacgaaaagaaaacttgaagacgcagcaaagaggcttgcccacctgtac
gacaagctgagggaccaggctctctctcccagcatccttggcggcctgcacgagatctgc
cgcggcgtggcagcgaggaactaccagcacggcctggaggtgcacacgcagatcgtcagc
agcagcaacttcagcgagatctccgccttcatgcccatcctcaaagtggtaatgaccatt
gccaacaagctggccgtctaa
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integrated database retrieval system
