Clupea harengus (Atlantic herring): 105903388
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Entry
105903388 CDS
T09045
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04260
Cardiac muscle contraction
char04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105903388
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
105903388
04261 Adrenergic signaling in cardiomyocytes
105903388
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105903388
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
105903388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
dCache_2
Caps_syn_GfcC_C
VWA_CoxE
Cache_3-Cache_2
Motif
Other DBs
NCBI-GeneID:
105903388
NCBI-ProteinID:
XP_042562014
Ensembl:
ENSCHAG00000020569
UniProt:
A0A8M1KJQ3
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MATGPSAAALETGKLERQLRCSGTGDLSTRKCYCASFLVWISPGVTIVDVAGSQQGIPLS
VVKLWASAFGGEIKSIAAKYSGSQLLQKKYKEFERRGRVEDIDGAKLVKKVAENMEEMFR
KKAEAVQRIVEAAEEAHHEHEENPDLQYDYFNAVLINEVDELGNSLDMGGEFLLEPNDHF
NNLAVNLSLSVVQVPTNMYNKDPAIVNGVYWSEALNKVFVDNFERDPSLIWQYFGSAKGF
FRQYPGVKWYPDEHRVIAFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVS
SILDTLGDDDFFNIIAYNQEIRFVEPCLNGTLVQADRANKHHFREHLDKLFAKGIGLLGN
ALTEAFTILNEFNQTGRGSLCSQAIMLVTDGATQMYDEVFEKFNWPDRKVRIFTYLIGRE
SAFADNMKWMACANKGKALTKSSTLADVQENVMRYLHVMSRPKVIDHEHNTVWTEAYVDN
ALTQAHKLKDSRGLSPITTVAMPVFSTKNETRNQGILLGVAGTDIPLQELMKAVPKHKLG
IHGYAFAVTNNGYILIHPDLRPLYQEGQKRRKPHYSSVDLSEVEWEDTHDVLRNAMVNRK
TGTFSMEVMKTVDKGKRVLKMHNDYYYTDIKGTPFSVGVALSRGHGKYFFKGNVSIDAGL
RDLDQQDVALADEWTYCNTDEHHEHRYLTQIQAIKLYLTGRKPHLKCDRELIQQVLFDAV
VTAPMEAYWTGLALNKSENSDKGVEIAFLGTRTGLSRTNLFVNPEQLTNQDILTAEDTEG
VFNADHFPLWYKRAAEQVPGTFIYSIPFSSVMENKSVVLASTAIQLLDDRKSPIVAAVGI
QMKLDFFQRKFWTASRQCAALDGKCSISCDSEDIKCYLIDNNGFILVSEEYLQTGLFFGE
VEGAVMNKLLLMGSFKKIPLYDYQALCKEYAGSGDSAHSLLNPFSAVKWLLTEIVIFLLE
FNLYSWWNIDLSVKADRGQRGRTVMVPCDTEYPAFVSERTIKETAGNIDCEGCM
NT seq
3044 nt
NT seq
+upstream
nt +downstream
nt
atggccaccggacccagtgcagccgctctagaaactggcaagcttgagcggcagttaaga
tgcagtggaaccggggatttgtctactcgcaagtgttactgtgcgagttttctggtttgg
attagcccaggtgtgactatcgtggatgttgccgggtcacaacaggggatcccactgtca
gtggtgaaactgtgggcgtctgcgtttggaggggaaataaagtccatcgctgcgaaatat
tcaggatcccagctgctgcagaagaaatacaaagagtttgagagaagaggccgagtagaa
gatatagatggcgcaaaacttgtgaaaaaagtggcagaaaacatggaagagatgttccgg
aaaaaagcagaggcggtacagcgcatcgtggaagcagccgaagaagcacaccatgaacat
gaggagaatccagacctacagtatgactacttcaacgccgtgctcatcaacgaggtggac
gagctggggaacagtttggacatgggcggggagttcctcctggagcccaacgaccacttc
aacaacctggccgtcaacctcagcctcagcgtggtgcaagtgcccaccaacatgtacaac
aaagatccagctattgtgaatggtgtgtactggtccgaagctctgaataaagtgtttgtg
gacaattttgaaagagacccctcacttatatggcagtactttggaagcgccaagggtttc
ttcagacaataccctggtgttaaatggtacccagatgaacaccgtgtcattgcatttgac
tgcaggaacaggaaatggtatatccaggcggctacttctccaaaggacgtggtgatcctg
gtggacgtgagcggcagcatgaaggggctgaggctgaccatcgcccgccagaccgtctcc
tccatcctggacacgctgggtgacgacgacttcttcaacatcatcgcctataatcaggag
attcgcttcgtggagccctgcctgaatggaaccttggtccaggctgacagggccaataag
caccatttcagagagcatctggacaagctttttgccaaaggaattggtcttctaggtaat
gcactgactgaggccttcaccatactgaatgagttcaaccagacggggcgggggagctta
tgcagccaggccatcatgctcgtgactgatggagccacacagatgtatgatgaagtcttc
gagaagttcaactggcccgataggaaggtacgcatcttcacttacttgattggacgtgag
tcggcttttgcggataacatgaaatggatggcctgcgctaacaaaggtaaggccctgacc
aaatcttccacattggccgatgtgcaggagaatgtgatgcggtacttgcatgtgatgagt
cgacctaaagtcatcgaccacgagcataacactgtctggaccgaggcctatgtggacaac
gcacttacacaagcacacaagctcaaggatagcagagggctcagtcccataacgactgtg
gccatgcctgtgttcagcaccaagaatgagacgagaaaccaaggcattcttctgggtgtg
gcagggactgatatccctcttcaagagcttatgaaagctgtaccaaaacataaacttggt
atccatggatatgcctttgccgtcaccaataatggatacattctcatccacccagacctg
aggcctttgtaccaggagggccagaagaggaggaagccccattacagcagtgttgaccta
tcggaggtggagtgggaggacacacatgatgttttgcgtaatgccatggtgaacagaaag
accggaacattctctatggaagtgatgaagactgttgataaagggaaacgtgtcctgaaa
atgcacaacgactattattacacagacatcaaagggaccccattcagtgtaggggtggcc
ctctccagaggtcacggtaaatacttcttcaaaggaaatgtttccatagacgcaggcctc
cgtgacctcgaccaacaagacgtggccctggcagatgagtggacctactgcaatacagat
gagcaccatgaacatcgctacctgacccagatccaggccattaaactctacctgactgga
cgcaagccccacctcaagtgtgacagggagctgatccagcaggtgttgtttgacgcggtg
gtgactgctcccatggaggcctattggacgggcctggctctgaataagtctgaaaattct
gataaaggtgtggagattgcattcctgggcacacgcactggcctctccagaaccaacctg
tttgtgaacccagaacagctgaccaatcaagacatcctgacagccgaggacacggagggc
gtgtttaacgcagaccacttccccctgtggtacaagagggcggcggagcaggtgcctggc
accttcatctactccatccccttcagctcagtcatggaaaataaaagtgttgttctggca
agcaccgctatccaactgctggatgaccgaaagtcaccaatagtagccgctgtagggata
cagatgaagctggatttctttcagagaaagttctggacagccagtcgacagtgtgcagct
ctggatggaaaatgttccatcagctgtgacagtgaggacatcaagtgctatctcatagac
aacaacggattcattctggtctcagaagagtacttacagacaggactgttcttcggtgaa
gtggagggagctgtgatgaacaagctgctccttatggggtcttttaaaaagatacccctg
tatgactaccaggccctgtgcaaagagtatgcaggaagtggtgacagcgctcattccctg
ctgaacccattctctgcagtaaaatggctcctgactgaaatcgtcatatttcttctggag
ttcaacctgtacagttggtggaatattgatctctctgttaaagctgatcgaggccagagg
ggccgcaccgtgatggttccatgtgacacggagtaccctgcctttgtttctgagcgcacc
atcaaagagacggctgggaacattgactgtgaggggtgcatgag
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