Clupea harengus (Atlantic herring): 105903398
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Entry
105903398 CDS
T09045
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04260
Cardiac muscle contraction
char04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105903398
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
105903398
04261 Adrenergic signaling in cardiomyocytes
105903398
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105903398
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
105903398
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
MCP-like_PDC_1
Cache_3-Cache_2
VWA_CoxE
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
105903398
NCBI-ProteinID:
XP_031424237
Ensembl:
ENSCHAG00000011976
UniProt:
A0A6P8FM51
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Position
5:complement(26953578..26979014)
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AA seq
1097 aa
AA seq
DB search
MAICSQSCSIACLVSVQIILIFCVPWLGVESHRFPQQYTIMHWARRIEQEIDRVLQHISG
AQQLKGIYSEKRRQYSLMKNDPQAMVEKVASDIEKLLAKKRKALSKLASEAERLQKEHLW
QDSIKELDMKYYDSKADLDYYSMEGDSEPTNSLELEFVYDPNFKNNVNYSFTAVQIPTDI
YKGAPLILNELNWTQALEKVFMENSRDDPSLLWQAFGSATGVTRYYPATPWRVPDKIDLY
DVRRRPWYIQGASSPKDMVILVDVSGSVSGLTLKLIKASVMEMLDTLSDDDYVNVARFNE
KAEPVIPCFEHLVQANVRNKKIFKDAVNQMQAKGTTEYKSGFHFAFDQLLNKTNVPRANC
NKMIMLFTDGGEDRAQDIFEQYNWPNKTVRVFTFSVGQHNYDVTPLQWIACANKGYYFEI
RSICAIRINTQEYLDVLGRPMVLAGDEAKQVQWTNVYQDALGLGLVVTGTIPVFNLTVEG
NSQNQLILGVMGIDVHLDEIKKLTPRYNLGANGYVFAIDQNGYLLLHPNLQAKAVDLPEP
VTLDFLDAEVEDAKKQEIRRQMIDGKLGEMTIRTLVKSIDEKYIDEAERMYTWTHIKDTD
YSLGLVLPPYSEYYLQADLSDVILQLQYLQSLLPNSFESGGHIFLAPREYCQRLPIAENN
TQFLADFISFVVNLRPDSEDCNQDLIHNLLLDSEIMFQLATRVWKSKDLDTYGFLALFAA
TESGITRVYPKMAADSWDEDPEPFNTNFYRRSLDNKGYMFKAPSRVSMDDPLTSENGTVG
ILVSTAVEVSVGGRTLKPAVVGVKLDLEAWVDKFKILASNVSDNRQGPHKCGPSRSCEMD
CEVNSDDLLCYLIDDGGFLVMSNQRDHWKKVGLFFGDVEPYLMHALYESSIFGRHQTFQY
QSVCEPSTSSHTGAAPRGIFVPSIADFLRLAWWSSAAAWTLLQQMLHVLAYNSWFNVDDA
MADSFDSRGGSSCVTIQSQFYFTNTTNTYDMLQDCGNCSRLFHSKRIENTNLLFVVAETL
PCGSCEVERLTLLKTDFHEENPCEVLNASRYRKNSAKCFDYNTLENTTECGGGYSLQASF
GLLIWVKIISYYLTGSS
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggcgatatgttcacagtcttgcagcatcgcctgccttgtatccgtccagattattctg
attttttgcgtaccatggcttggagtagagagtcacaggtttccccagcagtacacgata
atgcactgggccaggcgcatcgagcaggagattgacagagtactgcagcatatcagtgga
gcccagcagcttaaggggatctacagtgagaaaaggagacagtacagtctgatgaagaat
gacccccaagctatggtggagaaggtggcatctgacattgagaagcttttggcaaagaaa
cgcaaggccctcagtaagctggccagcgaggcagagcgcctgcagaaggagcatctctgg
caggacagcattaaggagctggatatgaagtattatgattccaaggcagacctggactat
tactccatggagggtgatagtgagccgacaaactcgttggagttagagtttgtttacgat
ccaaacttcaagaacaatgtcaattattcattcactgcagtacagatccccacagacatc
tataagggtgcgccattaatcctgaatgagctgaactggacacaggccttagagaaggtg
ttcatggagaacagtcgcgatgacccctccctcctctggcaggcttttgggagtgccaca
ggcgtcaccaggtactacccagctacaccatggagggtgcctgataagattgacctttat
gatgtcagaaggagaccctggtacatccagggggcctcgtcaccaaaggacatggtcatc
ctggtcgatgtgagtggcagtgtgagcggcctgaccttaaagctcatcaaggcatcagtc
atggaaatgctggacacgctttcagatgatgattatgtcaatgtggctagattcaatgag
aaggcagagccggttatcccttgctttgagcacctggtgcaggctaatgtacgcaacaag
aagatctttaaggatgccgtaaatcagatgcaggccaagggcaccacggagtacaagtcc
ggctttcactttgccttcgaccagcttctgaacaaaacaaatgtgccacgagccaactgc
aacaagatgatcatgttgtttacagacggtggtgaagatcgagctcaggacatttttgag
cagtacaattggcctaacaagacagtccgagtattcacattctctgtggggcagcacaat
tatgatgtcacccctttacagtggattgcttgtgctaataaaggatactattttgagatc
cggtccatctgtgccataaggattaacacacaggagtatttggatgttcttggacgaccc
atggtcttggctggggatgaggccaagcaagtgcaatggaccaatgtctatcaggatgca
ttgggcctaggactggtggtgactgggaccatacctgtgtttaacctgactgtggagggc
aactcacagaaccaacttatactgggggtgatgggcatagatgttcatctggatgaaatc
aagaagcttactcctcgctacaatctcggagctaatggatatgtgtttgccattgatcaa
aatggctacctcctcctccaccccaacctgcaggcgaaggccgttgacctcccagagcca
gtgacgctggactttttggatgcagaagtagaagatgccaaaaagcaggagattcggcgg
cagatgatcgatggcaaactgggggaaatgacaattaggacactggtcaaatccattgat
gagaaatacatcgatgaggctgagcgaatgtatacctggactcacatcaaagacaccgac
tacagtttgggtctggtactgccaccctacagtgaatactaccttcaggcggacttgagc
gatgtgatattacagctgcagtatttgcagtctttgctcccaaactcgtttgagtcgggc
gggcatattttcctggcaccaagggagtactgccagcgtctccccattgcggagaacaac
acccagtttctggcagacttcatctcctttgtggtgaacctgagaccagactcggaggac
tgtaatcaagacctcattcacaaccttcttttggactcagaaatcatgtttcagttggct
acaagggtgtggaagagcaaagacctcgacacgtatggcttcctggcgttgtttgcagct
acagaaagtgggataacacgtgtttaccccaaaatggccgctgattcatgggatgaagac
ccagagcccttcaacaccaacttctaccgccggagcttggacaacaagggctacatgttc
aaggctccctctcgtgtttccatggatgaccccctgacctctgagaatggcactgtgggt
attctggtcagcactgctgtggaggtgtcagtcgggggcaggactctgaagccggcagtg
gtgggagtgaagctggacctggaggcttgggtggacaagttcaagatcttggccagcaat
gtctctgacaatcgtcagggccctcataagtgtgggccttccagaagctgtgaaatggac
tgtgaagtaaacagtgacgatctgctctgctacctgatcgatgatgggggtttcctggtt
atgtccaatcagagagatcattggaaaaaggtgggactgttttttggcgatgtggaaccc
tacctgatgcacgcactgtacgagagctccatctttggtcgtcaccagaccttccagtac
caatctgtgtgcgagcccagtaccagcagccacaccggggcagcccccaggggcatcttc
gtgccctccatagctgactttctccgactagcttggtggtcttcagcagctgcgtggact
ctactccagcagatgctccatgtacttgcctataacagctggttcaatgttgatgatgcc
atggctgacagcttcgactcaagagggggcagtagctgtgtgaccatccagagccagttc
tatttcactaacactaccaatacctacgacatgctacaggactgcggaaactgttcaagg
ttgttccactccaaacggatcgagaacaccaacctgctcttcgtggtggccgagaccctg
ccctgcggcagctgtgaagtggagcggctgaccctcctcaagactgactttcacgaggag
aacccttgtgaagtcctgaacgcttcccgctatcgcaaaaattcagcgaagtgctttgac
tacaacacactggagaacacaacggagtgtggaggaggctactctctccaagcctccttt
ggcctcctcatatgggtgaagatcatttcatattacctcacgggcagttcttga
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