Clupea harengus (Atlantic herring): 105903464
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Entry
105903464 CDS
T09045
Symbol
cfap52
Name
(RefSeq) cilia- and flagella-associated protein 52
KO
K24728
cilia- and flagella-associated protein 52
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
105903464 (cfap52)
Cilium and associated proteins [BR:
char03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
105903464 (cfap52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
WD40_like
NBCH_WD40
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Beta-prop_NWD2_C
Beta-prop_SPT8
Beta-prop_EIPR1
PQQ_2
WDR54
WD40_CFAP43
Beta-prop_RIG_1st
Beta-prop_NOL10_N
KNTC1_N
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
105903464
NCBI-ProteinID:
XP_012686684
Ensembl:
ENSCHAG00000017251
UniProt:
A0A6P3W153
LinkDB
All DBs
Position
26:complement(10043116..10052315)
Genome browser
AA seq
618 aa
AA seq
DB search
MGSEAQDVCLLELEAVIGFNGHVFSGLIVHPDREHLIYPLGCTVILKSLKNNKQTFLHGH
TNNVSCVSVSKSGNFIASGQVTFMGFKADAIIWDFAKKEVYARLQLHKAKVEALAFSPND
KYLVTLGGQDDGSIVLWNIKTGQAICGSPASAHNAGHCLTVRYCNLNDDVFVSAGNCTLR
VWELDLPNRKIRPTECQTGQLKRVVKCIEIPEDDSFFYCGTTSGDILKVNLTTLLLNGCG
PVKHKFSQGVIAMRMLKTGDLLVGSGDGMLTLCNGTNFKMKKNAQLEGGVTSVSLRGEGH
QFFIGTDAGQIYRFGYTDFKPELFSSNHKNAVNGVAFPFGSSELFATCSKDDIRVWHAKT
SKEVLRISVPNMTCNALDFMRDGRSIVSAWNDGKIRIFTPETGRLMLVLNNAHSMGATAI
ACTKDCQKIVSGGGEGQIRVWEILKGSSRLLESMKEHKAEVTCVKIKSNDKECVSASSDG
ACIIWDLERYVRNQMVLANTLFRSVCYHPEEFQIITSGTDRKIGYWEVYDGSAIRELEGS
LSGAINGMHITQEGDHFVTGGDDKLVKVWHYSDGAVSHVGIGHSGSITSVQICPNNKHII
STSADGAVLRWRFPRRSS
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcgaagcgcaagacgtttgtctgcttgagctggaggcggtcataggcttcaat
gggcatgtattctccggactgatagtgcatcccgatagagaacatttgatatatcctctg
ggctgtaccgtcattctaaaaagtctcaaaaacaataagcaaacttttcttcacgggcat
accaacaatgtttcctgtgtcagtgtgtccaaaagcggaaatttcatcgcatctggtcaa
gtcactttcatgggcttcaaggctgatgccatcatctgggattttgccaagaaagaggtg
tatgcaaggcttcagctccacaaagccaaagtggaggcccttgcattctcccccaacgac
aaatatcttgttacccttggtggccaagatgatggcagtattgtgttgtggaacatcaag
actggtcaggctatctgtggatccccagcttcagcccacaatgcgggtcactgcttgacc
gtccggtactgcaacctgaacgacgacgtgtttgtctccgctggaaattgcacccttcgt
gtttgggagcttgacctccccaaccgaaagatccgtcccacggaatgtcagactggccaa
ctgaagcgcgttgtgaaatgcatcgagatccccgaggatgatagtttcttctactgtgga
acaaccagtggagacattctcaaagtcaacttgacgacgttgctgctgaatggctgtggg
cctgtcaagcacaagttcagtcagggtgtgatagctatgaggatgctgaagacaggagat
ctgctggtgggctcgggggacggcatgctcactctgtgcaatgggaccaatttcaaaatg
aaaaagaacgcgcagctggagggaggtgtgacatctgtttccctgcgtggagagggacac
cagttcttcattggcaccgatgctgggcagatctaccgctttggctacacagacttcaaa
cccgagctcttctcctccaatcataaaaacgcagtgaatggtgtggcttttcctttcggg
tcgtcagagctcttcgccacctgctcgaaggatgacattagggtatggcacgccaaaaca
tccaaagaggtgctgcggatctctgttcccaatatgacttgcaacgcactggacttcatg
cgggatggcagaagcattgtcagtgcctggaacgatgggaagatccgcatcttcaccccg
gagaccggtcgcctgatgctggtcctcaacaacgcccacagtatgggagcgacggccatc
gcctgcaccaaggactgccagaagattgtcagtggtggtggagagggacagattcgtgtg
tgggagatcctcaagggatcctccaggcttcttgagagcatgaaggagcacaaggcagaa
gtgacctgtgtcaagatcaagagcaatgataaagagtgtgtcagtgccagctcagacgga
gcctgtatcatatgggacctcgagcgttacgtgaggaatcagatggtcctggccaacact
ctcttccgaagcgtctgctaccacccggaggagtttcagattatcaccagtggcaccgac
cgcaagattggctactgggaagtgtatgatggatcagccattagagagctggaaggatcc
ctctcaggagccatcaatggaatgcatatcacacaggagggcgaccattttgttactggt
ggcgatgacaagctggtgaaggtgtggcactactctgacggtgcggtgagccatgtgggc
atcgggcacagtggcagcatcaccagcgtgcagatctgccccaacaacaagcacatcatc
agcaccagtgcagacggagctgtgcttcgctggaggttccctcgccgctccagttag
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