Clupea harengus (Atlantic herring): 105903554
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Entry
105903554 CDS
T09045
Symbol
abce1
Name
(RefSeq) ATP-binding cassette sub-family E member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
char03009
]
105903554 (abce1)
Ribosome biogenesis [BR:
char03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
105903554 (abce1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
Fer4_6
AAA
AAA_22
AAA_15
AAA_29
RsgA_GTPase
AAA_16
Fer4_2
Fer4_10
Fer4_21
NACHT
nSTAND3
AAA_23
SRP54
Fer4_4
TsaE
AAA_30
ORC-CDC6-like
AAA_24
Fer4_16
Fer4_7
Fer4_9
Fer4_3
AAA_5
AAA_19
Motif
Other DBs
NCBI-GeneID:
105903554
NCBI-ProteinID:
XP_012686778
Ensembl:
ENSCHAG00000019431
UniProt:
A0A6P8EUR6
LinkDB
All DBs
Position
22:complement(6849418..6857981)
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AA seq
599 aa
AA seq
DB search
MSEKPTRIAIVNQDKCKPKKCRQECKKSCPVVRMGKLCIEVTSQSKIVWISESLCIGCGI
CIKKCPFGALSIVNLPSNLEKETTHRYCANSFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGRFDAPPDWQEILTYFRGSELQNYFTKILEDDLKAIVKPQYVDQIPKTV
KGSVGSILSRKDDTKTEHTVCDMLDLTHLRGRNVEDLSGGELQRFACAVVCIQRADIFMF
DEPSSYLDVKQRLKAAITIRSLITPDRYIIVVEHDLSVLDYLSDFICCLYGVPSCYGVVT
MPFSVREGINIFLDGYVPTENLRFRETSLVFKVAETANEEEIKKMCRYQYPKMRKAMGDF
ELAIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLKPDEGGDVPLLNVSYKPQKISPKF
KGSVRALMHDKIRDAYMHPQFVTDVMKPMQIESIIDQDVQNLSGGELQRVALALCLGKPA
DVYLIDEPSAYLDSEQRLMAARVVKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGIPS
RSTVANTPQTLLAGMNKFLSLLEITFRRDPNNFRPRINKQNSIKDVEQKKSGNYFFLDD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaaaaccgactcgaatcgctattgtcaaccaagacaagtgcaaaccaaagaaa
tgccggcaggagtgcaagaaaagctgtccagttgtccgaatgggcaaactatgcatagag
gtgaccagtcagtccaaaattgtctggatttctgaatctctctgcattggatgtggtatt
tgcatcaagaaatgtcctttcggggccttgtcaattgttaacctgccaagcaaccttgag
aaagagaccactcacagatactgtgccaactcattcaagttgcatcggttgcctatccct
agaccaggcgaagttttgggactggtgggcaccaatggtatcggaaagtcaactgcactt
aagatccttgctgggaaacagaagcctaacctgggaagatttgatgccccaccagattgg
caagagatcctgacctatttcagggggtctgagcttcagaattacttcaccaagatcctg
gaggatgacctgaaggctattgtgaaaccccagtatgtggaccagattcctaagacggtc
aaggggagcgttggttctattctgagcagaaaggatgacactaaaacagaacatacggtc
tgtgatatgctcgatctgacccatctgagggggaggaatgtggaggatctgtctggagga
gagctccagcgttttgcctgtgctgtggtgtgcatccagagagcagacatttttatgttt
gacgagccctccagttacctggatgtgaagcagcgtttaaaagctgccatcaccattcgt
tccctcatcactccagacaggtacatcattgtagtggaacatgatctgagtgtgctggac
tacctgtcagacttcatctgctgcctgtatggcgtgcccagttgctatggggttgtcacc
atgcctttcagtgtcagggaaggaatcaatatcttcctggatgggtatgttcccactgag
aatcttcgcttccgtgagacatcactggtgttcaaagttgcggaaacggccaatgaggag
gagataaagaagatgtgccgctaccagtaccctaaaatgagaaaggccatgggcgacttt
gaactggccatcgtggcgggggagttcactgactctgagattatggtcatgctgggagag
aacggaactggcaagactacattcatcagaatgctggctggccgactaaaaccagatgaa
ggaggtgatgtacccctcttgaacgtcagctacaaaccccagaagatcagcccaaaattc
aaaggaagtgtgcgtgcactgatgcatgataagatcagggacgcttacatgcatccacaa
tttgtcactgatgtcatgaagcccatgcagattgagagtatcatcgaccaggatgtccag
aacctgtcaggaggagagctgcagagagtagccctggctctgtgtctgggcaaacctgct
gacgtctatctgatcgacgagccgtctgcctacctggactctgagcagcgtctaatggct
gctagggtcgtcaaaagattcattctccatgccaagaaaaccgcgtttgttgtggagcac
gacttcatcatggccacctatcttgccgaccgagtaattgtgtttgatggaatcccatca
agaagcacagttgcaaacacgccgcagactctgctcgctggaatgaacaagttcctctcc
ttgctggagattaccttcaggagagaccccaacaactttcgaccaaggatcaacaaacaa
aattccattaaggatgtggagcagaaaaagtctgggaactacttcttcctggatgactag
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