Clupea harengus (Atlantic herring): 105903555
Help
Entry
105903555 CDS
T09045
Symbol
smad1
Name
(RefSeq) mothers against decapentaplegic homolog 1
KO
K04676
mothers against decapentaplegic homolog 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04081
Hormone signaling
char04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105903555 (smad1)
09133 Signaling molecules and interaction
04081 Hormone signaling
105903555 (smad1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
105903555
NCBI-ProteinID:
XP_012686779
Ensembl:
ENSCHAG00000019349
UniProt:
A0A6P3W2Z9
LinkDB
All DBs
Position
22:complement(6829066..6843324)
Genome browser
AA seq
476 aa
AA seq
DB search
MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQ
PSSCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKALECCEFPFGSKQKDV
CINPYHYKRVDSPVLPPVLVPRTSEFNAKLSMLPRFRNPLHQTEPHMPQNATFPDSFPQQ
PPQPPVSSLPFVPHSPTNSYPNSPGSNAGSGATLPQSPSSTDPGSPFQMPETPPPAYMPP
DEPMTQDCPQPMDTNLLVPSLSLENSNRPDVQPVAYEEPKHWCSIVYYELNNRVGEAFQA
SSTSVLVDGFTDPSNNRSRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLS
DSSIFVQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAELLAQSVNHGFEAVYELTKM
CTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcacatcgctgttctccttcaccagcccggccgtgaagcggctgctgggctgg
aagcagggggacgaggaggagaagtgggcggagaaggcggtggacgccctggtgaagaag
ctgaagaagaagaagggcgccatggaggagttagagaaagccctcagctgccccggccag
cccagcagctgcgtcaccattccacgctcgctggacggacgcctccaggtgtcccaccgt
aagggtctgccacatgtcatctactgccgtgtgtggcgctggcctgacctccagtcccac
catgagctgaaggcactggagtgctgcgagttcccattcggttccaagcagaaggatgtc
tgtatcaatccctatcactacaagagagtagacagtccagtgctgccccctgtgttggta
ccgcgcaccagcgagttcaacgccaagctgagtatgctgcctcgctttcggaaccctttg
caccagactgagcctcacatgcctcagaacgctaccttccccgactccttcccacaacag
ccaccacaaccacctgtcagcagcctgccctttgttccacactcgcccactaacagctac
ccgaactcccccggcagcaatgcaggcagcggtgccactttaccacagtccccctccagc
acagaccctggcagccccttccagatgccagaaacccctccacctgcctacatgccacca
gatgagccaatgacccaagactgtcctcagccaatggacaccaacctgctggttccctct
ctgtctcttgagaacagcaaccgcccagacgtacagccagtggcctatgaggagcccaag
cattggtgcagtattgtttactatgagctgaataaccgtgtgggcgaggccttccaggca
tcttctactagcgtgctggtggatggcttcactgacccctccaataatcgcagccgcttc
tgcctgggcttgctctcaaatgtcaatcgcaactccaccattgagaacacacggcgccac
attggcaaaggcgtgcacctgtattatgtgggtggagaggtgtacgctgagtgtctgagt
gacagcagcatctttgtgcagagccgtaactgtaactaccaccatggcttccatccaact
acggtctgtaagatccctagtggctgcagcctcaagatcttcaacaaccaggagttcgcc
gagctgctggcccaatctgttaaccacggatttgaggctgtttacgagcttaccaaaatg
tgcaccattcgcatgagttttgtaaagggttggggcgccgagtaccaccggcaggatgtc
actagcaccccctgctggattgagatccacttgcatggcccactgcagtggctggataag
gtcctgacccagatgggctctcctcacaaccccatttcatcggtgtcctaa
DBGET
integrated database retrieval system
