Clupea harengus (Atlantic herring): 105903569
Help
Entry
105903569 CDS
T09045
Symbol
rapgef2a
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X2
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04517
IgSF CAM signaling
char04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105903569 (rapgef2a)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
105903569 (rapgef2a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105903569 (rapgef2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RA
RasGEF_N
cNMP_binding
PDZ
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
105903569
NCBI-ProteinID:
XP_031415135
Ensembl:
ENSCHAG00000020565
UniProt:
A0A6P8ESZ0
LinkDB
All DBs
Position
22
Genome browser
AA seq
1496 aa
AA seq
DB search
MASFVDNSFRHAVMKIPAERTQQDLQIVYSYLHGMEALSNLREHQLRLMCETVRYEQHEA
NEVLYYPDDIGSCWYILLSGSVFIKESMFLPRSSFGKRSAGSARRGCECIVLEPSEMLVV
DYVDESEVYFQRQASHRQSRRRFRKINQSGERETIIDTVEHEDYHLSSSSSSSSKPPLPH
AYHTESSKQQVSPRPPVDFSKLHLSESIHPHLTRSSHSACSFTSESGSSSLSDIYQSTES
ECGELDLSGLPETAVDSDEEEDDDDEEDVSRSADPLMSRDVVRDCLEKDPMDRTDDDIEQ
LLEFMQQLPAFANLSVWVRRELCAVMVFAVVERAGTVVLNHGEELDSWSVILNGSVEILY
PDGQSEALCMGSSFGVTPSMEKELMLGVMKTKVDDCQFVCIAQQEYCHILNRVELNTQRV
EEEGEIVMVKEHRDLDRTGTRKGHVVVKGTCERLMQHLVEDHSVVDPTYIEDFLLTYRTF
LPRPLSLGHRLLEWFKEPSLRDKVTRVVLMWVNNHFSDFEEEDAMSGFLEEFQSCLEKEK
MTGHLRLLNIACAAQAKPRVVCVSRASRDSALPFSLLGGAERGTRLFISAVEVGSNAEEA
GLKRGDQILEVNGQTFESLLLSKAMEILKGQLQLTMSVKTNLLVFKELVSRVLEERRSGV
PHLPKIGDSRKNRLSVPDLAVTLGGGGQEKVNRKAKAHTVGGRNKLLKILDKTRISILPQ
KPYSVGQSQDDSMVGLKQSKHSSSTLTASGTLSPSNPDLQNQQLASEHTNGHSDQDQVLR
VFKADQQSRYLMVTKETTAREVTNHAMREFGLSAPPEAYSLCEVTVTPEGVTKQRRLPDQ
LNKLADRIQLSSRYYLKSNSETETLCSDVEAQELMRESQVCLLSLSSVELANQLSSRNYL
LFSSIQPVDYITDLFKLRPVTDTARSLRRFEDLINQETFWVATEIVRESNQLRRAKVIKQ
LIKVAARCREVNNYNSTFNIISGLNLAPVSRLRGTWEKLPAKYDKLLSELQTVFDPSRNM
AKYRSLLNTPTHTLQPPVIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAREIRHVG
RMATVYTDPTLLYRTRKKKWRSLGSLSQTGSSTVLDMAMIGQKKRGRRGSFLSAKRLYEE
DLMIRRVRQYLTAYVHIVQIDEELLHTLSLQSEPAAQPVKREGERRAVESSPATPRSPTP
QASHTHLTRRRSSNKEMFGAKSPQPLQKMLNHSEEGRTQPKRQAEDSQSNASSLLSSPPV
SPQSPPRRGVYTASDGDQYSLLSASSCDLMDDVRGPHPHVHINMPAHTQSASNILATARP
EPDQISLGSYSLSQDQCDRASLDAADSGRGSWTSCSSGSHDNIQSIPQRCWDALSEGTAA
GRGYWAAPTGYWGDELEGETGTIKRRGNKPVIGHREGRFREPPPTPPGYTPLADVSYNPP
PGRRPPDYNAALQRSRLLKRTCDSPGPMGVQHVGHTHRQAPRPPQGKEEGEQVSAV
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttttgtagacaatagttttcgtcatgcagtaatgaaaatcccggcggagagg
acgcaacaggatcttcaaattgtgtactcctatctgcatgggatggaagcactgtccaat
ttaagagaacaccagctcaggttaatgtgtgaaacagtacgatatgaacaacatgaggct
aatgaagttctctactatcctgatgacattggcagctgctggtacattctgctgtctggc
tcggtcttcatcaaagagtccatgtttcttcctcgcagcagctttgggaagcgttcggca
ggcagtgcaaggagaggctgtgagtgcatcgtcctggagccatcagagatgctagtggtg
gactatgtggatgagagcgaagtgtacttccagcggcaggcgtctcaccggcagtcacgt
cgcaggtttcgcaagatcaaccagagcggggagagggagaccatcattgacaccgtggag
cacgaagactaccacctcagcagcagcagcagcagcagcagcaagccccccctgccccac
gcctaccacacagagagttccaaacaacaggtgagcccacgtcccccagtggatttctct
aagctccacctctcagagagtatccacccccatctgacccgctccagccactcagcatgc
agcttcaccagtgaatctggtagcagcagcttgtcagacatttaccagtcgacagagagc
gagtgtggggagctggacctgagcgggctgccagagacagcggtggactcggatgaggaa
gaggatgacgacgatgaagaagatgtcagtcgctcagccgaccctctcatgagcagagat
gtggtgagggactgcctggaaaaggacccgatggatcgcacagacgacgacatcgagcag
ttactggagttcatgcagcagctgccagcctttgccaacttgagcgtatgggtgcgcagg
gagctgtgtgccgtcatggtgttcgccgtggtggagcgggcaggaaccgtggttctaaac
catggggaggagctggactcgtggtctgtgattctgaacgggtcagtggagattctgtac
cctgatggccagagtgaggctctgtgtatggggagcagttttggcgtgaccccctccatg
gagaaggagctcatgttgggagtgatgaagaccaaagtggatgactgccagtttgtgtgc
atcgcacagcaggagtactgccacattctcaaccgcgttgagctgaacacacagcgtgtg
gaggaggagggggagatcgtcatggtgaaggaacaccgtgatctcgaccggacaggaaca
cggaagggacatgttgttgtcaagggcacatgtgagcgcctgatgcagcatctggtggag
gaccactcagtggtggatcccacctacatcgaggacttcctgttgacctatcgcaccttc
ctgccacgccccctcagcctcggacacagactcctggagtggtttaaagagcccagtctg
cgagacaaggtcacccgcgtggtgctcatgtgggtcaacaatcacttcagtgactttgag
gaggaggatgccatgagcggcttcctggaggaattccaaagctgtttggaaaaggagaag
atgacgggacacttgcgcctgttgaacatcgcatgcgcggctcaggcgaagccccgagtt
gtgtgtgtgtcccgcgcctcccgtgactcagccctgcccttcagcctgctgggcggggcc
gagagagggacccgcctcttcatcagcgccgtggaggtgggcagtaatgcagaagaggcg
gggcttaaacgaggagaccagattctggaggtgaacggtcagaccttcgagagcctgctg
ctgtctaaagccatggagatccttaaaggccagttacaactcaccatgagcgtcaagacc
aacctgctagtgtttaaggagctagtttccagagtgttagaggagaggaggagtggagta
ccgcacctgccaaagatcggtgattcacgaaagaaccgcctctctgttcctgacttggcc
gtaaccctagggggtggaggtcaagaaaaggtcaacaggaaggctaaagctcacactgtg
ggtggccgcaacaaactcctcaagattctggacaaaactcgcatcagcatcttgccacag
aagccatatagtgtgggacagtcccaggatgacagcatggtgggtctgaagcagtccaaa
cactcatcatccactttaacagccagcggaaccctgtcgccaagcaaccctgacctgcag
aaccaacaactagctagtgagcacacaaacggccattcagatcaagaccaggtgttgcgt
gtgttcaaggctgaccagcagagcaggtacctgatggttaccaaggagaccactgctaga
gaggtgacaaatcatgcgatgagagagtttggtctgagtgccccccctgaagcctattcg
ctgtgtgaggtgactgttacacctgagggcgtgaccaaacagagacggcttcctgatcag
ctcaacaaacttgctgacagaatacagctcagctccaggtactatctgaagagcaacagt
gagacggagactctgtgttctgacgtggaggctcaggagttgatgcgggagtctcaggtc
tgcctgctgtcgctgagctcagtggagctggccaatcagctgtcatcacgcaactacctg
ctcttctccagcatccaacctgtggactacatcaccgacctcttcaagctccgccctgtc
actgatacggctcgcagcctacgccgatttgaggaccttatcaaccaggagaccttctgg
gttgccacggagatagttagggaatccaaccagctgcgcagggcgaaggtcatcaagcag
ctcatcaaggtggcagcacgctgtcgagaggtcaacaactacaactccaccttcaacatc
atcagtgggttgaatctggcccctgtgtctcgcctgaggggaacatgggaaaagctacct
gctaagtatgacaagttgctgtcagagctgcagactgtgtttgacccatcgcgcaacatg
gccaagtaccgcagcctgcttaacacacccacacacactctccagccgcccgtcatccct
ctcttccccgtcatcaagaaggacctcaccttcctacatgaagggaatgactcaaaggtt
gatggtttggtgaactttgagaagctgagaatgatcgccagagagatcagacacgtgggc
cgcatggccacagtatacacagatcccacgctcctgtacagaaccaggaaaaagaagtgg
aggagtctggggtccctgagccagacaggtagctcgacggtgctggacatggctatgatt
ggccaaaagaagcgtggcaggcggggctccttcctgagtgccaagcgtctgtatgaggag
gatctgatgatccgccgcgtgcgccagtatctcaccgcgtacgtgcacatagtccagatc
gacgaggagctcctgcacacgctctctctgcagtctgagcccgccgcacaaccagtcaag
agagaaggagagagaagggctgtggaatcctcaccggccacgccccgaagccccacccct
caagcctcacacacacacctgacccgaaggaggtcctcaaataaagaaatgtttggtgcc
aagtccccacagcccctgcagaagatgctgaaccactctgaagaggggcggactcagccg
aagaggcaggcagaggacagccaatcaaacgcttcgtcactgctctcctctccacctgtt
tcaccacagagcccaccacgcagaggtgtgtacacagcctcagatggggatcagtacagc
ctcctcagcgcgtcctcttgtgacctgatggatgacgtgcgaggcccccatccccacgtg
cacataaacatgccggcacacacacaatcagccagcaacatactcgctacagccagacca
gagcctgaccagattagcctgggctcgtactctctgtctcaggatcagtgtgatcgcgcc
tcactggacgctgctgacagtggacggggaagttggacttcctgctcaagtggttcccat
gacaacatccagagcatcccgcagaggtgttgggacgcattgtccgagggaacagcagct
ggtcggggctactgggccgcacccaccggttactggggagatgagctggagggggagacg
ggaactatcaaacgccgtggcaacaagcctgtcataggtcacagagaagggcgtttccgt
gagcccccgcccaccccaccaggctacacgccgttggctgacgtcagctataacccgccc
cccggacgacgtcccccagactacaatgctgcactgcagaggtcacgccttctcaagaga
acatgtgactctccagggccaatgggggttcagcatgtcggccacacccaccggcaggct
ccgcgtccacctcaggggaaggaagagggggagcaggtgtcggcggtatga
DBGET
integrated database retrieval system
