Clupea harengus (Atlantic herring): 105903604
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Entry
105903604 CDS
T09045
Name
(RefSeq) fibrillin-2
KO
K23342
fibrillin 2/3
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105903604
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
char00536
]
105903604
Glycosaminoglycan binding proteins [BR:
char00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105903604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
EGF
FXa_inhibition
hEGF
TB
EGF_3
Fibrillin_U_N
Plasmod_Pvs28
EGF_FBN_1st
Motif
Other DBs
NCBI-GeneID:
105903604
NCBI-ProteinID:
XP_031433345
Ensembl:
ENSCHAG00000013394
UniProt:
A0A6P8GEB0
LinkDB
All DBs
Position
12:12567191..12658212
Genome browser
AA seq
2902 aa
AA seq
DB search
MTGRKWTMAFVLGYVSLLGILVNIVMGQIPENHGRTQYDGSAASSRVRRRGKQDALTGPN
VCGSRFHSYCCPGWKTLPGGNQCIVPICRNSCGDGFCSRPNMCTCPTGHITPTCGTKSPQ
QCSIRCMNGGACAEDHCTCPKGYTGAHCGQPVCEKQCQNGGRCIGPNRCACVYGFTGPQC
ERDYRTGPCFTQVNNQMCQGQVTGIVCTKTLCCATVGRAWGHPCEICPAQPQPCRRGFIP
NIRTGACQDVDECQAIPGLCQGGNCINTVGSYECKCPAGHRQNEINQKCEDVDECTTTPR
TCDGGRCVNLVGSFSCVCPSGLVPSADKTRCLDQHSGLCFSGLLSGRCTQELPGRYSKAQ
CCCDAGRCWARGNLPELCPVPGSEAYQRLCQEGAPVRPYPEGDPVIVGGRVPYPQAPEYD
PTINGRRVNGNGHPYPQTPENGNSNRRHPINGNGHKIPQQPDYATLNHTADYCRQVPNVC
INGHCIPVASSYRCECNKGYMLDGRGDCMDFDECASDPCSNGDCVNTPGSYYCKCHTGFL
RTPTKQTCIDIDECLHNGVLCNNGRCLNTEGTFQCICNAGFQLTPDRRNCVDHDECASTN
MCLNGMCINEDGSFKCICKPGFILASSGRYCIDIDECQTPGMCMNGRCLNTDGSFRCECM
AGLAVSTDGRSCIDTHMRSTCYGGIKKGVCIRPFQGAVTKSECCCANADYSFGEPCQPCP
ARNSAEFQALCGSGIGFSVDGTDINECALDPDICANGVCENLRGSYRCICNVGYETDGSG
RNCVDIDECLVNRLLCDNGLCRNVPGSYSCTCPKGYLFRQDSETCEDVNECEISPCVSGA
CRNNAGSFSCECSPGSKLDPTGLICIDSLKGTCWLHIQDGRCEVNINGGTLKSECCSTLG
AAWGSPCEQCEIDPVCSRGFARPKGITCEDVNECEVFPGVCVNGRCVNSRGSFKCQCPEG
LTLDSTGRLCVDIRSEQCYLTYDEDTCTQSVSGRFRMDACCCTVGAAWGKECDACPEPGS
REYDTLCPRGPGFANRGDVLTGRPFYKDINECKVFPSICTHGKCRNTIGSFRCRCNSGFA
LDMEERNCTDIEECRISPDLCGHGTCVNTPGSFECECFEGYESGFMMMKNCMDIDECERN
PGLCRGGSCENTDGSYLCVCPHGHQLSADGDACEDVNECELSSSLCRNGKCVNVVGTYRC
TCTSGYQPTPDLQGCTDIDECTIENGGCDLHCTNSEGSYQCSCNSGYALMPDQRSCNDVD
ECEEEPGICDGGQCSNIPGEYHCLCFDGFMASLDMKSCIDVNECELNANLCMFGECENTK
GSFICHCDVGYSVKIGTSGCTDVDECEVDAHNCDLHATCVNTPGGFHCSCREGWLGDGVK
CVDLDECTNGTHHCSASAECVNSPGSYRCSCSPGFTGDGVTCTDTDECAENVNLCENGQC
LNVPGGYRCECEMGFVRAPDSKSCKDIDECTFHSICVFGTCKNLPGMFRCICDDGYELDR
SGGNCTDVDECMDPINCVNGLCVNIPGSYECNCPNDFELNPTGVGCVDTRVGNCFREASP
RGRGSLSCSVEVGVGVSRSSCCCSLGRAWGNPCELCPPINSSDYSTLCPGGEGFRPNPIT
IILEDIDECQELPGLCQGGNCLNTFGSFQCDCPPGYYLNEDSRICEDIDECVSNPGICGP
GTCYNTLGNYTCVCPQEYMQVNGGNNCMDMRKSLCYRNYNGTVCENELAFNLTHRLCCCS
YNVGKAWNKPCEACPTPATDEYRFLCGNIVPGFKLDIETGKAVDIDECREIPGICANGVC
INQIGSFRCECPTGFSYNDLLLVCEDIDECSSGESLCQRNADCINSPGSYRCECSDGFNL
SPTGACIDRNECLEIPNVCSHGECVDIQGGYECVCHNGFRVSVNHRMCMDVDECVRQPCG
NGTCKNTVGSFNCLCHPGFEITHNNDCTDIDECTNSYGQICRHGHCINSIGSFQCLCDEG
YEPNLEGKNCIDVNECVILPGTCAPGTCQNLDGSFRCICPEGYRVLNEHCVDVNECVEDP
NICLFGTCFNSPGSFECVCKPGFILSENGRRCYDKRESYCFTRFESGKCSLPQAFNTSKA
KCCCSNMPKEGWGDPCELCPKETDAGFKDLCPFGFGIVPGFDDSRIDLNECVENPGICYN
GHCINTDGSFRCECPMGYTLNYTGVHCIDIDECLVGNPCGNGTCTNAIGGFECTCDDGFE
PGPMMTCEDINECGQNPLLCAFRCINTFGSYECSCPAGYTLREDGRMCKDLDECSEGLHD
CESRGMACKNLIGTFMCICPPGMMRRLDDELCQDENECRTKPGICENGRCVNTIGSYMCE
CGEGFQPDSTRTQCLDYREGFCFTEVLQTMCQMSSSSRTPSTKSQCCCDGGRGWGNQCEL
CPLPGTAKYKKLCPHGHGYATDGRDIDECRLIPDVCKNGKCINTMGSYKCHCKPGYTTTI
SGTACVDRDECVMSPKPCNFICKNTEGSYVCSCPRGYTLQEDGRTCKDLDECQTKKHNCQ
FICVNTIGGFTCKCPPGFTQHHTACIDKNECAGEASLCGTKGICQNSPGSFNCDCQHGYS
LDNTGLHCEDVDECKSTHRCQYGCQNMLGGYRCSCPQGYTQHYQWNQCVDENECSNPTSC
GSASCYNTLGSFKCACPSGYNFDQFSSSCQDLNECTTRKNPCNYGCSNTEGGYLCGCPPG
YFRVGQGHCVSGTGFGKGLHMPHAGEERVEEDNALSPEACYECKINGHSKRGTRRRRDAN
GTLAAEEPEVSLASLDMDEPLMLVLNTSQLDPDEHLLELRPALRPLDGHVRYAIAGGSGA
DVFRLEHRDGLSYLHLASPVAGEAWQRQIRPAPGSYVLEISSAPLFAPAQLRALESSKDR
DYLSGELGENLHMRLHIQLQEN
NT seq
8709 nt
NT seq
+upstream
nt +downstream
nt
atgacggggagaaagtggactatggcttttgtacttggatatgtgagtttgttgggcatt
ctggtgaatattgtaatgggacagattcctgaaaatcacgggaggacacaatatgatggc
tctgcagcaagtagcagagtacgcagacgtggaaaacaagatgcgcttacgggaccaaat
gtgtgtggatctcgtttccattcctactgctgtccagggtggaaaactttgccagggggc
aaccagtgtatcgtgcccatatgccgtaacagctgtggggatggtttctgctcacgcccc
aacatgtgcacttgcccgactggtcacattaccccaacctgtgggaccaaatccccccag
cagtgtagtatcaggtgcatgaatggcggggcctgtgcggaggaccactgcacgtgtccc
aagggctacacaggagcccactgtggacagcccgtctgcgagaagcagtgccagaatggc
gggcgttgcattggacccaaccggtgtgcctgtgtctacggcttcacagggccccagtgt
gaaagagactacagaacgggtccctgcttcacccaggtcaacaaccagatgtgccagggc
caggtgactggcatcgtctgcaccaagacgctgtgctgtgccaccgtgggccgagcctgg
ggccacccctgtgagatctgcccggcccagcctcagccctgccgcagaggtttcatcccc
aacatccgcaccggggcctgccaggatgttgacgagtgccaggccattccagggctgtgc
caaggagggaactgcattaacaccgtgggctcgtacgagtgcaagtgcccagccggacat
cgtcagaacgagatcaatcagaaatgtgaagatgtagacgagtgtaccaccaccccacgc
acgtgtgacggcggccggtgtgtgaacctggtgggcagcttctcctgcgtgtgcccgtct
gggttggtgccctctgcagacaagacccgctgcctcgaccagcactcgggcctgtgtttc
tctggtctgctgagcgggcgctgcacccaggagctgccgggccgctacagtaaggctcag
tgctgttgtgacgccggccgctgctgggccagaggcaacctgccagaactctgccccgtc
ccgggatctgaggcgtaccagaggctgtgtcaggagggagctccggtaagaccatacccc
gagggggatccagtgatcgtgggcggccgagtgccatacccccaggccccagagtacgac
cctacgatcaacggccgcagagtcaatggaaatggacacccctacccccagaccccagag
aatggaaatagcaacaggaggcaccccatcaatggcaacggtcacaaaataccccagcag
cctgactatgccaccctgaaccacacggcggactactgcaggcaggtgcccaatgtctgc
ataaacgggcactgcatccccgtggcgtcgagctaccgctgcgaatgtaacaaaggctac
atgctggatggcagaggagactgtatggatttcgacgagtgcgcctcagacccctgctct
aatggagactgcgtcaacacccccggctcctactactgcaagtgccacactggcttcctc
aggaccccgaccaagcaaacctgcatagacattgacgagtgcctgcacaacggggtgctg
tgcaacaacgggcgctgtctgaacacggagggtaccttccagtgcatctgcaacgcaggc
ttccagctcactcccgacaggaggaactgcgtggaccacgatgagtgcgcctccaccaac
atgtgcttgaacggcatgtgcatcaacgaggacggcagcttcaagtgcatctgcaaacct
ggcttcattctggcctccagtggccgctactgcatagatattgatgagtgtcagacccca
ggcatgtgtatgaatggccgctgtcttaacactgatggctctttccgctgtgagtgcatg
gcagggcttgccgtgagtacagacggacgttcctgcatagacacacacatgcgcagcacc
tgctacggaggcatcaagaagggggtgtgcattcgccccttccagggagcggtcaccaag
tccgagtgctgctgtgccaatgccgattacagctttggcgagccctgccagccctgcccg
gccaggaattcagctgaattccaggcgttgtgtgggagtggaatcggcttctcagtagac
ggcacagatattaatgagtgtgcgctggaccctgacatctgtgctaacggcgtgtgtgag
aacctgagggggagctaccgctgcatctgtaacgtgggctacgagaccgacggcagcggc
aggaactgtgtggacattgacgaatgcctggtgaaccggctgctgtgtgacaacggcctg
tgccggaacgttccgggaagctacagctgcacctgcccaaaggggtatctctttaggcag
gactctgagacgtgcgaagatgtgaatgagtgtgagatcagtccgtgtgtgagcggggcg
tgtaggaacaatgctggctccttctcctgcgagtgctcgccaggcagcaagcttgacccc
acgggactcatctgcattgacagcctgaaaggcacctgctggctccacatccaagatggc
cgctgtgaggtcaacatcaacggcgggacactgaagtcggagtgctgctccacgctgggg
gccgcctggggtagcccctgcgagcagtgcgagatcgatcctgtttgctccagagggttc
gctcgtccaaaaggcatcacctgtgaagacgtgaacgagtgtgaggtgttccccggtgtg
tgtgttaatggccgctgcgtgaacagccgcggttccttcaagtgccagtgtccagagggc
ctaaccctggactccacgggacgcttgtgtgtcgatatccgctcggagcagtgttacctc
acgtacgatgaggacacctgcacccagtccgtgtctggaaggttccggatggacgcctgc
tgctgcactgtgggggctgcctgggggaaggagtgtgacgcttgcccggagcctggcagc
cgcgagtacgacaccctctgtccgcgaggccccggctttgccaaccgaggagacgtactc
accgggagacccttctacaaggacatcaatgaatgtaaagtgttccccagcatctgcacc
catggcaaatgccgcaacacgattggcagcttcaggtgtcgctgtaacagcggcttcgct
ctcgacatggaggaacggaactgcactgacatcgaggagtgccgcatctcgccggacctg
tgtggtcacgggacctgcgtcaacacgcccggcagcttcgagtgcgagtgcttcgagggc
tacgagagcggcttcatgatgatgaagaactgcatggacattgatgagtgtgagcggaac
cctggcctgtgccgtggaggctcctgtgagaacactgatggcagctacctgtgtgtgtgt
ccacatggtcatcagctgtctgctgacggggatgcctgtgaggatgttaacgagtgtgag
ctgagctcctcgctgtgtcgaaacggcaagtgtgtgaacgtagtgggaacatatcgctgc
acctgtacctccggctaccagcccacacctgacctacagggatgcacagacattgatgag
tgcaccatagagaatggaggctgtgatctgcactgcaccaactcagagggcagctatcag
tgcagctgtaactcaggctacgccctcatgcccgaccagaggagctgcaatgatgtggat
gaatgtgaggaggagcctggcatctgtgatggaggacagtgctctaacatccccggggag
taccactgtctgtgcttcgacgggttcatggcgtccctcgacatgaagagctgcatagat
gtgaacgagtgtgagctgaatgccaacctgtgcatgttcggggagtgtgagaacaccaag
ggctccttcatctgccactgcgacgtgggctactccgtcaagatcggcacatctggctgc
acagatgtggacgagtgtgaggtggacgcccataactgcgatctccatgccacctgtgtc
aacaccccggggggcttccactgctcctgtcgagaaggctggctgggcgacggggtcaag
tgtgtggacctggacgagtgcactaatgggacacaccactgcagtgccagtgctgagtgt
gtgaactcccccggctcctaccgctgctcctgctcaccgggcttcactggagatggcgtc
acctgcacagacacggatgagtgtgctgaaaatgtgaacctgtgtgaaaacggccagtgc
ctgaacgtgcccggaggctaccgctgcgagtgtgagatgggcttcgtccgggcccctgac
agcaaatcctgcaaagatatcgatgagtgcaccttccatagcatctgtgtgtttggcacc
tgcaagaacctccccggaatgttccgctgcatctgtgacgatggctatgagctagacagg
tccggaggaaactgcacagacgtagatgagtgcatggaccctataaactgtgtgaatgga
ctctgtgtgaacatccctggctcctacgagtgtaactgcccaaatgactttgagctcaac
cctactggagtgggctgtgtggacactcgtgtggggaactgtttccgggaggcgagtcct
cgcgggcgcggcagtctgtcgtgtagcgtggaggtgggggtgggcgtcagccgctcctcc
tgctgctgctcgctgggccgagcctgggggaacccctgtgaactctgcccccccatcaac
tcctcggactacagcactttgtgtccaggtggagagggcttcagaccaaatcccatcacc
atcatcctggaagacattgacgaatgccaggagttgccaggactttgccagggagggaac
tgtctgaacacctttgggagtttccagtgtgactgccctcccggctactacctcaatgag
gacagccgcatctgtgaagacattgacgagtgtgtgtcgaacccgggcatctgtggacct
ggcacctgctataacaccctgggcaactacacctgtgtgtgcccacaggagtacatgcaa
gtcaatggaggcaacaactgcatggacatgaggaagagcctctgttacaggaactacaat
ggcaccgtgtgtgagaacgagttggccttcaacctcacccaccgactctgctgctgttcc
tacaacgtgggcaaagcctggaacaagccctgtgaagcctgcccaacacccgccacagat
gagtaccgtttcctctgtggcaacattgtacctggattcaaactggacattgagaccggt
aaagccgtagacattgatgagtgtcgggagatccctggtatctgtgccaacggtgtttgc
atcaaccagatcggaagcttccgctgcgaatgccccacaggcttcagctacaatgacctc
ctgctcgtgtgtgaagacatagatgagtgcagcagtggtgagagcctgtgccagaggaac
gcagactgcatcaacagccccggtagctaccgctgcgagtgctccgacggcttcaacctc
tcccccaccggtgcctgcatcgaccgcaacgagtgcttggagatccccaacgtctgcagc
cacggggagtgtgtggacatccagggcggctacgagtgtgtctgccacaacggcttcaga
gtgtccgtcaaccacaggatgtgcatggacgtcgacgagtgtgtgcggcagccctgtgga
aacggcacgtgcaagaacacggtgggctccttcaactgcctctgtcaccccggctttgag
atcacacataacaacgactgcacagacattgacgagtgcacgaactcgtacggccagatc
tgcaggcacggccactgcatcaacagcatcggctccttccagtgcctgtgtgacgaggga
tacgagcccaatctggagggcaaaaactgcatcgatgtgaacgaatgtgttatcctgcct
ggaacttgtgctcccggcacgtgccagaacctggatgggtcgttccgctgcatctgtcct
gagggttacagggtgctgaacgaacactgcgtagatgtcaatgagtgtgtggaggatccc
aacatctgtctgtttgggacctgtttcaacagccctggcagctttgagtgtgtttgcaaa
cctgggttcatcttgtcagagaacggacgcagatgttatgataagcgggagagctactgc
ttcacacgctttgagagcggcaagtgctcgctcccgcaggccttcaacacatccaaggcc
aagtgctgctgcagcaacatgcctaaagagggctggggcgacccctgtgagctctgcccc
aaggagactgatgctggcttcaaagacctttgtccgtttggctttggtatagtccctggc
tttgatgactcacgtatagacctgaatgaatgcgtggagaatccaggcatctgctacaat
gggcactgtatcaacactgacggctccttccgctgtgaatgtcccatgggctacacgctc
aactacaccggggtgcactgtatcgacattgatgagtgcttggtgggaaacccatgtggg
aacggcacctgcactaatgcgatcgggggctttgagtgcacctgtgatgatggctttgaa
ccaggacccatgatgacctgtgaagacataaacgagtgcgggcagaacccattgctctgt
gcgttccgctgcattaacacgttcggcagctacgagtgcagctgcccagcgggctacacg
ctcagggaggacggcaggatgtgcaaagacctggatgagtgttctgagggccttcatgac
tgtgagtcccgggggatggcctgcaagaacctcatcggcaccttcatgtgcatctgcccg
ccagggatgatgcgccgcctggacgatgaactgtgtcaagatgagaatgagtgccgcact
aagcctggtatctgtgagaacgggcgctgtgtgaacaccatcggcagctacatgtgtgag
tgcggggaaggcttccagccagactccacccgcacacagtgcttagactaccgggagggc
ttctgcttcacggaggtgcttcagacaatgtgccagatgtcgtccagcagcaggaccccc
tccaccaagtctcagtgctgctgtgacgggggccgcggctggggcaaccagtgcgaactc
tgccccctgcccggcaccgccaagtacaagaagctgtgcccacacggccatggatacgcc
accgacggcagagacatagacgagtgcagactcatcccagacgtgtgtaagaacggaaag
tgcatcaacaccatgggctcctacaagtgccactgcaaacctgggtacaccactactatc
agtggaacagcatgcgtcgaccgggatgaatgtgtcatgtctcccaagccgtgcaacttt
atctgcaagaacacagagggcagctatgtgtgctcctgtccccgtggttacacactgcag
gaggacggcaggacctgtaaagatctagacgagtgtcagaccaagaagcacaactgccag
ttcatctgtgtcaacaccatcggtggcttcacctgcaagtgccctcctggttttactcag
caccacacagcctgcatagataaaaatgagtgcgcgggagaagcctccctctgcggaacc
aagggcatctgccagaacagcccaggcagcttcaactgcgactgccagcacggatactcc
ctggacaacactggcctgcactgcgaagatgtggatgagtgtaagagcacccacaggtgc
cagtatggctgccagaacatgctaggaggctatcgctgcagctgcccccagggctacaca
cagcactatcagtggaatcagtgtgtggatgagaacgaatgctccaaccccaccagctgt
ggctcggcgtcctgctacaacacgctgggcagcttcaagtgtgcctgcccctcgggctac
aacttcgaccagttcagcagcagctgccaggacttgaacgagtgcaccacgcgcaagaac
ccctgcaactacggctgctccaacaccgaggggggctacctgtgcggatgccccccgggc
tacttcagagtgggccaaggtcactgtgtgtctggaactggctttgggaaaggcctgcac
atgcctcatgcgggagaagagcgagtggaggaggacaacgccctctcccccgaggcctgc
tacgagtgcaagatcaacggccactccaagaggggcacgcggaggagacgggacgccaac
ggaaccctggcagcagaggagccggaggtgagcctggccagtctggacatggatgagccg
ctgatgctcgtgctcaacacctcccagctggaccctgacgagcacctcctggagctacgg
cccgccctgcggcccctcgacggccacgtgcgctacgccatagccgggggcagcggggcc
gacgtcttccgtctggagcaccgcgacggcctgagctacctgcacttggcgtcaccggtg
gcgggagaggcgtggcagcggcagatacggcccgcgcccggaagctacgtgctggagatc
agcagcgcgccactcttcgctcccgcccagctccgagcgctcgagagcagcaaggacaga
gactacctctcaggggagctgggcgaaaacctgcacatgagactgcacatccagctgcag
gagaactag
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