Clupea harengus (Atlantic herring): 105903605
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Entry
105903605 CDS
T09045
Symbol
nkx2.5
Name
(RefSeq) homeobox protein Nkx-2.5
KO
K09345
homeobox protein Nkx-2.5
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105903605 (nkx2.5)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
105903605 (nkx2.5)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
105903605
NCBI-ProteinID:
XP_012686839
Ensembl:
ENSCHAG00000022155
UniProt:
A0A6P3W140
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Position
20:7361556..7362984
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AA seq
315 aa
AA seq
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MAMFSNQMTSTPFSVKDILNLEQSEDMVSLDMSPRLDTALPTSSCMLAKFKQEPFLEMPA
GVSLFSEDDNDAKANKNTSLNFAAAFYGKNFLEMDIVKEGKTDEAFEEKERKDIYPSQDE
PGEEVKPEDSDRPKQRKRRKPRVLFSQAQVYELERRFKQQKYLSAPERDHLANVLKLTPT
QVKIWFQNRRYKCKRQRQDQTLEMVGIPPPRRISVPVLVRDGKPCLGDASTYSTSYNVGI
NHFTYNTYPTFGNYPSSGCNTNYTCNYPAASAMPSLQPSPTNSSYMNFGVGDLNNAQNTF
QSNSGVSSLHGIRAW
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggctatgttttcaaaccagatgacttcaactcctttctcggtgaaagacatactgaac
ttggagcagagcgaggatatggtgtccctggatatgtcgcccaggctggacacagccctt
cccacctcctcctgcatgttggccaaattcaagcaggagcctttcctagagatgccagcc
ggagtttctctctttagcgaagacgacaatgacgccaaagctaacaaaaacacctcgctg
aacttcgccgctgccttttatgggaagaacttcttagaaatggatattgtcaaggagggg
aagacggacgaggcgttcgaagaaaaagagagaaaagatatatatccttcacaagatgaa
ccaggggaagaagttaaacctgaggactcggaccggcccaaacagagaaaaaggcgaaaa
cctcgggttctgttctcccaggcgcaggtatacgagctggaacggcgcttcaagcagcag
aaatacttgtctgcacccgagcgagatcacctggctaacgtgctgaagctcaccccaacc
caggtgaagatctggtttcagaaccgccgctataaatgcaaaagacagcgccaggaccaa
acgctggagatggtgggaatccctccgcccaggcgcatctctgtacccgttctggttcgg
gatgggaagccatgtctgggagacgcatcaacctatagcacttcatataacgtgggcatt
aaccatttcacctacaacacttatccgactttcggcaattacccgagctccgggtgtaac
acaaactatacatgcaactaccccgctgccagtgccatgccatcacttcagccctcacca
accaacagcagttacatgaatttcggagtaggggatcttaataacgcccagaacacgttt
cagtccaacagtggtgtatcatctctacatggtatccgggcgtggtga
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