KEGG   Clupea harengus (Atlantic herring): 105903658
Entry
105903658         CDS       T09045                                 
Symbol
polr1f
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA43 isoform X2
  KO
K03004  DNA-directed RNA polymerase I subunit RPA43
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105903658 (polr1f)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:char03021]
    105903658 (polr1f)
Transcription machinery [BR:char03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     105903658 (polr1f)
SSDB
Motif
Pfam: RPA43_OB SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 105903658
NCBI-ProteinID: XP_012686887
Ensembl: ENSCHAG00000022198
UniProt: A0A6P3W1B9
LinkDB
Position
19:complement(19787972..19790725)
AA seq 369 aa
MANLQHEEDDPHHAKMSTEISTSTQSVPFENTYTAVKDEAAISCLIPTFAEACKLVNTPY
SCLVLDTHRRHVALPPMYLKKKKTGIEEELNAELLKFSEKCKGVPVAYDNIKLVGQHGDI
FDDQGYIHLNIEASFVVFKPNKGQKLEGVINKIGQTFVGCLVHGCFNASILKPREMTSEM
WRDSGLVIGGSLEFEVVQLDADAAGVLLIRGRLHKTWYEEMLRLTDPGTDDATEEPFMPA
DNTATEAALDGVDGVQPEKKKKKKKDKSKDKEALEDSVVKDSQLNGSGNTELTRTDSDVN
SNGHVEKKKKKKKKDKETSSQATEGVPASDSSGYLSDKGSKKRKESDEANDASLPDNLEK
PKAKKKKIK
NT seq 1110 nt   +upstreamnt  +downstreamnt
atggcaaacttgcagcatgaggaagatgacccacaccatgcaaaaatgtcaacagaaata
tctacatcgacgcagtcagtaccttttgaaaatacatatacagcggttaaagacgaagcc
gctatttcctgtttaatacccactttcgcagaggcttgtaaacttgttaacactccgtac
tcgtgcctggtgctcgacacacaccgacgacacgttgccctgccacccatgtatttgaaa
aagaagaagacgggaattgaagaagaacttaacgcagagcttctgaagttttccgaaaaa
tgtaagggagtacctgtcgcttatgacaacataaagttagtgggacagcatggggacata
ttcgacgaccaaggatacattcacctgaacattgaagcttcgtttgttgtctttaaaccc
aataaggggcaaaaacttgagggagtgatcaacaagataggccagacattcgtgggttgc
ttggtgcacggctgcttcaatgcctccatcctgaagcccagagagatgacgtcggagatg
tggagagattcagggttggtcattgggggaagcctggagtttgaggtggtccagttggat
gcagacgcggctggtgtcctgctcattcgtgggaggcttcataagacctggtatgaggag
atgttgaggcttactgatcctggcacagacgatgccacagaggagcccttcatgccagct
gacaacactgccacagaggctgcattggatggggttgatggcgtacaaccggaaaagaag
aaaaagaagaagaaagacaaaagcaaagacaaagaggcacttgaggactctgttgtgaag
gacagtcagctcaacggtagtggtaatacggagctcaccaggacagatagcgacgtgaac
tcgaatggtcacgtcgagaagaagaaaaagaaaaagaagaaagacaaggagacaagtagt
caggcgacggagggggttcctgccagtgactccagtggttaccttagtgacaaaggcagc
aagaagaggaaagagtctgatgaagcaaatgatgctagtcttcctgacaatttagaaaag
cccaaagctaaaaagaaaaagataaagtga

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