Clupea harengus (Atlantic herring): 105903709
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Entry
105903709 CDS
T09045
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 19
KO
K08633
a disintegrin and metalloproteinase with thrombospondin motifs 19 [EC:3.4.24.-]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105903709
Peptidases and inhibitors [BR:
char01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
105903709
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
ADAMTS_C
ADAMTS_CR_2
Reprolysin
TSP_1
Reprolysin_5
Reprolysin_3
TSP1_spondin
Pep_M12B_propep
Reprolysin_2
Reprolysin_4
TSP1_CCN
PLAC
Peptidase_M10
DUF3810
Motif
Other DBs
NCBI-GeneID:
105903709
NCBI-ProteinID:
XP_031433601
Ensembl:
ENSCHAG00000012426
UniProt:
A0A6P8GAJ5
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All DBs
Position
12:complement(12426204..12487156)
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AA seq
1129 aa
AA seq
DB search
MHLISLCGLFYQLCFLGMCATADTPSSQDSEFEIVFPELFPPPPDKPNIREGDANAGSSS
REVRSISNWESYESHELYNRESPGPQTKAASGLRLKIPAFGKDLEFILNRDTRFLSQKFM
VEKRPKARKASPRNPPDFSSANAEAACYYSGTVLNYAGSIASFSTCAGLMGFIQLNEDFL
FIEPLNHTLAVTGHAHRLYRRKRSLPKQSAPKYCGVISEKHKSKSRKHAEASRGKRYSYK
LQQEYNVETLVVVDPAMVSYHGSEAAKRFVLTIMNMVFHLFQHKSLGIHINIRLTKLVLL
SEKPPDMYIGHHGEKMLESFCQWQQEEYGRKSMMSDFSSRWRDDSPSVDSAIFITRKDFC
VHKDEPCDTVGIAYLSGMCSEKRKCILAEDNGLSLAFTIAHEMGHNMGVSHDNDHPSCAD
GLHIMSGEWIKGQNPGDVSWSTCSREDVEKFLRSKASSCLLQTDPLSLNSVILPSKLPGA
TYTPDEQCQILFGPSASHCEKMQYVMCSGLWCHVDGEKDCKTKLDPPMDGTECDTGKWCR
AGECVSRTAHPEPVLGEWTSWGPWGTCSRTCSSGVTARQRKCESRRSGGKGQDCLGTGAQ
YRLCENQPCPAGTPSFREQQCQTFNRLALHWYAVMDDERPCTLFCSSSGKEQPMLLAEKV
LDGTSCGTMESGVCANGTCQKVGCDGILGSQAREDHCGACNGNGKSCKVIKGDFNRTRGA
AGYVEAVVIPKGARRIRVVEEKPAQSYLALKDAGKHSINSDWKIEHPGTFSIAGTTVHYV
RRGLWEKMSAKGPTTSPLHLMVLLFNEQNYGIHYEYTIPADPTPEPKAALVPKPSESLFM
WTHSGWEDCHAVCGGGERKTVVACNRIVNKTTSVADSRKCRHLTKPEAQVRKCNEQPCQT
RWMTTDWTACSRTCGKGSQSRQVACTQQLPNGTQVKARDRDCAGPKPASQQRCEGQDCLT
VWEAGVWSECSAKCGRGARHRLVKCTNPRRKCDLSTLPREVEECEDYSKCYVWRTGDWAK
CSVTCGKGMQSRVIQCMHKITGRHGNECFSSEKPAAYRPCQQQPCNEKINVNTITSPRLA
ALTFKCLRDQWPVYCKVIREKNLCTDMRWYQRCCETCRDFYAQKLQQKS
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcatctaattagcctttgcggtcttttttatcagctgtgctttttgggcatgtgtgcc
actgcagatacgccgtcttctcaggattcggagtttgaaatcgtattcccagagttgttt
ccaccgcctcctgataaaccaaatatccgagagggtgacgccaacgccgggagcagttct
cgggaggtccgctccatttcaaattgggaaagttacgaatcgcatgaactgtacaatcgg
gagtcaccaggaccgcaaactaaagctgcttcgggtttgcgtctcaaaatccctgccttt
ggaaaagatctggaattcatattgaatcgggatacgcgtttcttgtcccagaaattcatg
gtagagaagagaccgaaagcacgaaaggcatctccgcgcaacccgccagatttctcatct
gccaacgcggaggcagcgtgttattacagcggaactgttctcaattacgcaggatccatc
gcctcattcagcacctgcgccggtctgatgggctttattcagctcaatgaagattttctt
ttcatcgagcctttgaatcacactctggcggtcacgggacatgctcacagactctaccgg
cgaaagcgctccctgcccaaacagtctgcacccaaatactgcggagtcatttctgagaag
cacaagagtaagagcaggaagcatgcagaggctagccgagggaagcgctactcgtataaa
ctacagcaggagtacaacgtggagacactggtggtggtcgacccggccatggtcagttac
cacggttccgaggcagccaagcggtttgttctcaccatcatgaacatggtctttcacctg
ttccaacacaagagccttggcatccacatcaatatccggctaaccaaactggtgctgctc
tccgaaaaaccaccagatatgtacatagggcaccatggggagaagatgttagagagcttc
tgccagtggcagcaggaggagtacggcaggaagagcatgatgtcagacttcagctccaga
tggagggatgactctccctcagtggactccgccatcttcattacgaggaaggatttctgc
gtccacaaggatgaaccatgtgatacagtggggattgcgtacctcagcggcatgtgcagt
gagaagaggaagtgcattctcgccgaggacaacggcctcagcctggccttcaccatcgcc
cacgagatgggccacaacatgggggtgagccatgacaacgaccacccatcgtgcgctgac
ggcctccacatcatgtccggggagtggatcaaaggacagaaccccggagacgtgtcctgg
tccacctgcagccgcgaggatgtggagaagttcctcaggtccaaggcaagcagttgtctg
ctacagacagacccactcagtctgaactctgtcatcttgccgtccaaattgccgggcgcg
acctacacaccagatgaacagtgtcagatcctcttcgggccctctgcctcacactgtgag
aagatgcagtatgtgatgtgctcggggctgtggtgccatgtggatggggagaaggactgc
aaaaccaaactagacccccccatggatgggaccgaatgtgacaccggaaagtggtgccgg
gctggagagtgtgtgagccggacggcacatccagaaccggtgctgggagagtggacctcg
tgggggccttggggaacctgcagccgaacctgcagcagcggcgtcaccgcccgacaacgc
aagtgtgagagccgcaggtctggtgggaaagggcaggactgcctgggcacgggcgcgcag
tacaggctgtgtgagaaccagccgtgccccgctggcacccccagcttcagagagcagcag
tgccagacattcaaccgcctcgccctccactggtacgcagtcatggatgatgagaggccg
tgtaccctcttctgttcctcttctggcaaagagcaacccatgctactcgccgagaaggtg
ctggacggcacttcatgcggaaccatggaatctggcgtttgtgccaatgggacatgtcag
aaagtggggtgtgacggtatcctgggctctcaggccagagaagaccactgtggcgcttgc
aatgggaacgggaagtcctgcaaagtcatcaagggtgacttcaaccgcactcgtggagca
gcaggttatgtggaggcggtggtcatccctaaaggggccaggagaatacgtgtggtggag
gagaagcctgcccagagttacctagcactgaaggacgccggcaagcactctatcaacagc
gactggaagatcgagcacccgggcacgttcagcatcgccggcaccactgtacactacgtc
cgcagaggactctgggagaagatgtctgccaaggggcccaccacttcccctctgcatctt
atggtgctgctttttaatgagcagaactacgggatccactacgagtacaccattccagcc
gacccaactccagagcccaaggcggcactggtgcccaagcccagcgagtccctcttcatg
tggacccactcaggctgggaggactgccacgcggtgtgtggaggaggtgaaaggaagact
gttgtcgcttgcaaccgaattgtcaacaaaacgacgagtgtggcagacagtcgtaagtgt
cgtcacctgaccaaaccagaggcacaagtacgcaagtgcaacgagcagccctgccaaaca
aggtggatgacgacggactggacggcgtgctcgcgcacctgcgggaagggctcccagagc
cggcaggtggcctgcacccagcagctgcccaacggcacgcaggtcaaggcccgcgaccgc
gactgcgccggccccaagccagcctcccagcagcgctgcgagggccaggactgcctgacc
gtctgggaggctggcgtgtggtccgagtgctcagccaagtgcgggcggggggcgcgccat
cgcctggtgaagtgcaccaacccgcgcaggaagtgtgacctgagcacgctcccccgggag
gtggaggagtgtgaggactattccaagtgctacgtctggaggaccggagactgggccaag
tgttctgtcacctgcgggaaaggaatgcagtcccgggtcatccaatgcatgcacaagatc
accgggcgccacggcaacgagtgtttttcatctgagaaaccagctgcttaccgaccctgc
cagcagcagccctgcaatgagaagatcaatgtcaacaccatcacctcaccacgtttagct
gctctgacatttaagtgtctgcgggaccagtggccggtgtactgcaaggtcatccgggag
aagaacctctgcacagacatgcgctggtaccaacgctgctgcgaaacgtgccgggacttt
tacgcacagaagctgcagcagaaaagttga
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