Clupea harengus (Atlantic herring): 105903717
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Entry
105903717 CDS
T09045
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
char04990
]
105903717 (snx13)
Domain-containing proteins not elsewhere classified [BR:
char04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
105903717 (snx13)
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
HipN
Motif
Other DBs
NCBI-GeneID:
105903717
NCBI-ProteinID:
XP_031442359
Ensembl:
ENSCHAG00000021540
UniProt:
A0A6P8GT55
LinkDB
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Position
19:complement(19650212..19681083)
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AA seq
1000 aa
AA seq
DB search
MGNLVTAGNRGLLNDWDHVSLHHGSLTDPVGCLSSWRQASLSVWGWGGLGVVLFLITFGP
FAIFYLAFYIVCFVGGGFAVTLLFGKTNSEKHLERCEHSYLPATPTGIIKTLDEMKLEIK
PIKIDRRLTGSSFIDEPLQQVIQFALRDYIQYWYYTLSEDESFLLEIRQTVQNALVQFST
RSKEVDWQPYFTTRLVDDFATHLRVFRKAQERLSDRDDPKQRESSEELLESFFEAEVEME
RKICRDMVCTSPKDEEGFLRDLCEVLLYLLLPPGDFHNKNMRYFLREVLARGVLLPLINQ
LSDPDYLNQLVIWMIRDSSCNYEAFMTILKLTDKTFELEAVKDKVLEELQYLRSLDTAGD
DINMIKNQINSLLFVKKVCETRIQRLQSGKEVDALKLAANFGKLCIIPLEHILVHNIALQ
FFMDYMQQMGGQADLFFWLTVEGYRVTAQQQLEVMQSWEQDGKKQGSQTKGLLKAAALGV
YEQYLSDKASPRVQVDEASIEKLGEKLNNEDPTPEIFDDIQRKVYDMMLRDERFYPSFRQ
HPLYVRMLAELDMLKEPSYRGSDDGDGESFNGSPTGSINLSLDDLTNASAEDVLLFHAFI
SDTADDFLNHLPVAGVCNDHGKTYALYAITVFRKNADGSEDTWKTYRRYSDFHDFHMRIT
EQFENLTTILKLPGKKTFNNMDREFLEKRKKDLNGYLQLLLNPEMVKACPTLTPYIYDFL
ENKAYSKGKGDFARKMDTFVNPLRSSMRNVSNAVKSFPDNLAEGMNKMSDNVGRMSERLG
QDIKQSIFKVPPMIPKSDIGPEHCRVSAQLDDNVDDNIPLRVMLLLMDEIFDLKERNQWL
RRNIKNLLQQLIRATYGDTINRKIVDHVDFMTSPEQVADYVKKFRDSYWPNGILAENLPR
RDKSIRMRTRVAAKTSLLGIMPDELKHIIGAETTRKGILRVFDMFQNQQMNRRLVYVLLE
GFLETMFPQCKFPELFVKLHSRSPRTRRYSQRVKASSLKR
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggggaacctagtgacagcaggcaaccgtggactattgaacgactgggatcatgtgagt
ctgcaccacggctctctgactgacccggttgggtgtttatccagctggagacaggccagt
ctgtccgtctggggatgggggggtctcggagtcgtgctcttcctcatcacattcggaccc
tttgcaatcttttatctggcgttttacatagtctgcttcgttggcgggggctttgccgtc
acgcttttatttggaaagacaaactccgagaaacacctggagaggtgcgaacactcttac
ctgcctgcaacaccaaccggtataataaagactttggatgaaatgaagctggagatcaaa
cccatcaagatcgaccgcaggctcacggggtccagcttcatcgatgagcccctgcaacag
gtgatccagtttgccctgagggactacatccagtactggtactacacgctgagcgaggac
gagtccttcctgctggagatccgacagactgtgcagaacgcactcgtccagttctccaca
aggtctaaagaggtggactggcagccttacttcaccacgcggctggtggatgactttgct
acgcacctgcgcgtcttcaggaaagcccaggagaggctgtctgacagggacgaccccaaa
caacgagagtcctctgaggagctgctggagtccttcttcgaggcggaggtggaaatggag
aggaagatctgccgggacatggtgtgcacctcccccaaagacgaagaaggcttcctcaga
gacctgtgtgaggtgctgctgtatctgttactacctccgggagacttccacaacaagaac
atgcgatacttcctcagggaagtgcttgccagaggcgttcttcttcccctgataaaccag
cttagtgacccggattatctcaatcagttagtcatatggatgatcagggactccagctgt
aactacgaggccttcatgaccatcctgaagctgacagacaagaccttcgagctggaggct
gtcaaggacaaagtcctggaggagctgcagtacctgcgctcgctggatactgccggagat
gacataaatatgatcaagaatcaaatcaacagtttactgtttgtgaagaaagtctgtgaa
acaaggatacaaaggctgcaatcaggaaaggaagtggatgccttgaagctggcggcaaac
tttgggaagctgtgcatcatcccgctggagcacatcctggtgcataacatcgccctgcag
ttcttcatggactacatgcagcagatgggtgggcaggcagacctgttcttctggctgacg
gtggagggctaccgggtgacggcgcagcagcagctggaggtcatgcagagctgggagcag
gatggcaagaagcagggcagccaaaccaaaggcctgctcaaggctgccgcgctgggcgtc
tacgagcagtacctctccgacaaggcctctcctagagtacaggtggatgaagcttcaatt
gaaaagctgggagagaaactcaataatgaggatcccacgccagagatatttgatgatatc
cagagaaaggtgtatgacatgatgctgagggatgagcgcttctacccctccttcaggcag
caccctctctacgtgcggatgctggcagagctggacatgctgaaggagcccagctacagg
ggctctgatgatggagacggagagtccttcaacggttctccgactgggagcataaatctg
tcgctggatgacctgaccaatgccagtgcggaggacgtcctgctgttccacgcgttcatt
tctgacaccgctgacgattttctaaaccaccttcccgtggcaggcgtgtgcaacgaccac
ggcaagacctacgcgctctacgccatcactgtcttccgcaagaatgccgacggcagcgag
gacacctggaagacctaccgtcgctatagcgacttccacgacttccacatgcggatcaca
gaacagtttgagaacctcacaaccatactgaagctgccagggaaaaagacctttaacaat
atggacagagagttcctagagaagaggaaaaaagacctcaatggatatctacagctgcta
ctcaatccagagatggtgaaagcctgccccaccctcactccctacatatatgacttcctg
gagaacaaagcctacagtaaaggcaagggtgactttgcacgcaagatggacaccttcgtg
aaccccctgcggagttccatgcgtaacgtgtccaacgccgtcaagtccttccccgacaac
ctggcggagggcatgaacaagatgtctgacaacgtgggccgcatgtctgagagactgggc
caggacatcaagcagtccatattcaaagtcccgcctatgatcccaaagtcagacattggg
cccgaacactgccgagtctcagcccagctggacgataatgtggatgacaacatcccgctg
cgagtgatgctgctcctgatggatgagatctttgacctgaaggagaggaaccagtggctg
cgaaggaacatcaagaacctgctgcagcagctcatacgggccacgtacggagacaccatc
aacaggaaaattgtggatcatgttgacttcatgacgtctccagagcaggtggctgactat
gtcaagaaattcagggactcctactggcccaatggaatcctggcagagaatctgccccgc
agagacaaaagcatccgcatgaggaccagagtggcggccaaaaccagcctgctgggcatc
atgccagacgagctgaagcacatcatcggggcggagaccacacgcaagggcatcctgcgg
gtcttcgacatgttccagaaccagcagatgaaccggcggctggtctacgtgctgctggag
ggcttcctagagaccatgttcccgcagtgcaagttcccggagctcttcgtcaagctgcac
tcgcgctcgcctcgcacgcgccgctactcgcagagagtcaaggcctcctcgctcaagagg
tga
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