KEGG   Clupea harengus (Atlantic herring): 105903717
Entry
105903717         CDS       T09045                                 
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
  KO
K17925  sorting nexin-13
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:char04990]
    105903717 (snx13)
Domain-containing proteins not elsewhere classified [BR:char04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   105903717 (snx13)
SSDB
Motif
Pfam: PXA Nexin_C PX RGS Rep3_C HipN
Other DBs
NCBI-GeneID: 105903717
NCBI-ProteinID: XP_031442359
Ensembl: ENSCHAG00000021540
UniProt: A0A6P8GT55
LinkDB
Position
19:complement(19650212..19681083)
AA seq 1000 aa
MGNLVTAGNRGLLNDWDHVSLHHGSLTDPVGCLSSWRQASLSVWGWGGLGVVLFLITFGP
FAIFYLAFYIVCFVGGGFAVTLLFGKTNSEKHLERCEHSYLPATPTGIIKTLDEMKLEIK
PIKIDRRLTGSSFIDEPLQQVIQFALRDYIQYWYYTLSEDESFLLEIRQTVQNALVQFST
RSKEVDWQPYFTTRLVDDFATHLRVFRKAQERLSDRDDPKQRESSEELLESFFEAEVEME
RKICRDMVCTSPKDEEGFLRDLCEVLLYLLLPPGDFHNKNMRYFLREVLARGVLLPLINQ
LSDPDYLNQLVIWMIRDSSCNYEAFMTILKLTDKTFELEAVKDKVLEELQYLRSLDTAGD
DINMIKNQINSLLFVKKVCETRIQRLQSGKEVDALKLAANFGKLCIIPLEHILVHNIALQ
FFMDYMQQMGGQADLFFWLTVEGYRVTAQQQLEVMQSWEQDGKKQGSQTKGLLKAAALGV
YEQYLSDKASPRVQVDEASIEKLGEKLNNEDPTPEIFDDIQRKVYDMMLRDERFYPSFRQ
HPLYVRMLAELDMLKEPSYRGSDDGDGESFNGSPTGSINLSLDDLTNASAEDVLLFHAFI
SDTADDFLNHLPVAGVCNDHGKTYALYAITVFRKNADGSEDTWKTYRRYSDFHDFHMRIT
EQFENLTTILKLPGKKTFNNMDREFLEKRKKDLNGYLQLLLNPEMVKACPTLTPYIYDFL
ENKAYSKGKGDFARKMDTFVNPLRSSMRNVSNAVKSFPDNLAEGMNKMSDNVGRMSERLG
QDIKQSIFKVPPMIPKSDIGPEHCRVSAQLDDNVDDNIPLRVMLLLMDEIFDLKERNQWL
RRNIKNLLQQLIRATYGDTINRKIVDHVDFMTSPEQVADYVKKFRDSYWPNGILAENLPR
RDKSIRMRTRVAAKTSLLGIMPDELKHIIGAETTRKGILRVFDMFQNQQMNRRLVYVLLE
GFLETMFPQCKFPELFVKLHSRSPRTRRYSQRVKASSLKR
NT seq 3003 nt   +upstreamnt  +downstreamnt
atggggaacctagtgacagcaggcaaccgtggactattgaacgactgggatcatgtgagt
ctgcaccacggctctctgactgacccggttgggtgtttatccagctggagacaggccagt
ctgtccgtctggggatgggggggtctcggagtcgtgctcttcctcatcacattcggaccc
tttgcaatcttttatctggcgttttacatagtctgcttcgttggcgggggctttgccgtc
acgcttttatttggaaagacaaactccgagaaacacctggagaggtgcgaacactcttac
ctgcctgcaacaccaaccggtataataaagactttggatgaaatgaagctggagatcaaa
cccatcaagatcgaccgcaggctcacggggtccagcttcatcgatgagcccctgcaacag
gtgatccagtttgccctgagggactacatccagtactggtactacacgctgagcgaggac
gagtccttcctgctggagatccgacagactgtgcagaacgcactcgtccagttctccaca
aggtctaaagaggtggactggcagccttacttcaccacgcggctggtggatgactttgct
acgcacctgcgcgtcttcaggaaagcccaggagaggctgtctgacagggacgaccccaaa
caacgagagtcctctgaggagctgctggagtccttcttcgaggcggaggtggaaatggag
aggaagatctgccgggacatggtgtgcacctcccccaaagacgaagaaggcttcctcaga
gacctgtgtgaggtgctgctgtatctgttactacctccgggagacttccacaacaagaac
atgcgatacttcctcagggaagtgcttgccagaggcgttcttcttcccctgataaaccag
cttagtgacccggattatctcaatcagttagtcatatggatgatcagggactccagctgt
aactacgaggccttcatgaccatcctgaagctgacagacaagaccttcgagctggaggct
gtcaaggacaaagtcctggaggagctgcagtacctgcgctcgctggatactgccggagat
gacataaatatgatcaagaatcaaatcaacagtttactgtttgtgaagaaagtctgtgaa
acaaggatacaaaggctgcaatcaggaaaggaagtggatgccttgaagctggcggcaaac
tttgggaagctgtgcatcatcccgctggagcacatcctggtgcataacatcgccctgcag
ttcttcatggactacatgcagcagatgggtgggcaggcagacctgttcttctggctgacg
gtggagggctaccgggtgacggcgcagcagcagctggaggtcatgcagagctgggagcag
gatggcaagaagcagggcagccaaaccaaaggcctgctcaaggctgccgcgctgggcgtc
tacgagcagtacctctccgacaaggcctctcctagagtacaggtggatgaagcttcaatt
gaaaagctgggagagaaactcaataatgaggatcccacgccagagatatttgatgatatc
cagagaaaggtgtatgacatgatgctgagggatgagcgcttctacccctccttcaggcag
caccctctctacgtgcggatgctggcagagctggacatgctgaaggagcccagctacagg
ggctctgatgatggagacggagagtccttcaacggttctccgactgggagcataaatctg
tcgctggatgacctgaccaatgccagtgcggaggacgtcctgctgttccacgcgttcatt
tctgacaccgctgacgattttctaaaccaccttcccgtggcaggcgtgtgcaacgaccac
ggcaagacctacgcgctctacgccatcactgtcttccgcaagaatgccgacggcagcgag
gacacctggaagacctaccgtcgctatagcgacttccacgacttccacatgcggatcaca
gaacagtttgagaacctcacaaccatactgaagctgccagggaaaaagacctttaacaat
atggacagagagttcctagagaagaggaaaaaagacctcaatggatatctacagctgcta
ctcaatccagagatggtgaaagcctgccccaccctcactccctacatatatgacttcctg
gagaacaaagcctacagtaaaggcaagggtgactttgcacgcaagatggacaccttcgtg
aaccccctgcggagttccatgcgtaacgtgtccaacgccgtcaagtccttccccgacaac
ctggcggagggcatgaacaagatgtctgacaacgtgggccgcatgtctgagagactgggc
caggacatcaagcagtccatattcaaagtcccgcctatgatcccaaagtcagacattggg
cccgaacactgccgagtctcagcccagctggacgataatgtggatgacaacatcccgctg
cgagtgatgctgctcctgatggatgagatctttgacctgaaggagaggaaccagtggctg
cgaaggaacatcaagaacctgctgcagcagctcatacgggccacgtacggagacaccatc
aacaggaaaattgtggatcatgttgacttcatgacgtctccagagcaggtggctgactat
gtcaagaaattcagggactcctactggcccaatggaatcctggcagagaatctgccccgc
agagacaaaagcatccgcatgaggaccagagtggcggccaaaaccagcctgctgggcatc
atgccagacgagctgaagcacatcatcggggcggagaccacacgcaagggcatcctgcgg
gtcttcgacatgttccagaaccagcagatgaaccggcggctggtctacgtgctgctggag
ggcttcctagagaccatgttcccgcagtgcaagttcccggagctcttcgtcaagctgcac
tcgcgctcgcctcgcacgcgccgctactcgcagagagtcaaggcctcctcgctcaagagg
tga

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