Clupea harengus (Atlantic herring): 105903724
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Entry
105903724 CDS
T09045
Symbol
nr1d2b
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2b isoform X1
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105903724 (nr1d2b)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
char03310
]
105903724 (nr1d2b)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105903724 (nr1d2b)
Nuclear receptors [BR:
char03310
]
1. Thyroid hormone like
1D. Rev-Erb
105903724 (nr1d2b)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
105903724
NCBI-ProteinID:
XP_012686964
Ensembl:
ENSCHAG00000016185
UniProt:
A0A6P3W1J9
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Position
19:complement(21558766..21569866)
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AA seq
607 aa
AA seq
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MDSTKAAGGVIAYISSSSTGPDSCHSDCSNSSYQSSSSSPRAPSPGQRQGQQRDSAPATS
RSANHSTGKTRSTSTAKCGITKINGLVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQ
NIQYKKCLKNETCSIMRINRNRCQQCRFKKCLLVGMSRDSVRFGRIPKREKQRMLLEMQS
AMNNMMNNSQLHNQLHGNQTPSAPLINASPPCPMEVPAEDPLPAPTSSSLPGSSPCSSQS
ESSADPKPEPSISMDTSSNSSSSSSGADSGEEEVIGTLTRAHQETFMYNQEQGSPSAEPR
RSPSATERIHDDSKTMEERQDAWNFRNNVATVTGHNNKLTSSSQPEISEGPHVMDNTPSH
CPVQMTNAAPGGHCPVTGHGMSHRATHNRAMTSSNGFTGPAWRGGNRMYLVCPMNTSPYV
DPQKSGHSIWEDFSMSFTPAVREVVEFAKRIPGFQDLSQHDQVSLLKAGTFEVLVVRFVS
LFDVKERTVTFLSGKKYSVEALRSMGAGDLLNSMFDFSEKLLALNLSEEEMSLFTAVVLV
SADRSGIENVNSVEALQETLIRALRSLVTKNHPNEATIFTKLLLKLPDLRSLNNMHSEQL
LAFKVHP
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggattccacaaaagcagcagggggtgtcatagcgtacatcagctcctcaagcaccggc
ccggattcatgtcacagcgactgttccaatagcagctaccagtcctcctcctcctcgcca
cgagccccgtcaccaggccaacggcagggccagcagagggactctgccccggccacatca
cggtcggccaatcacagcaccgggaagacgcgctccacttccaccgcaaaatgcggcatc
acaaaaatcaatggcctggtgcttttgtgtaaagtctgcggtgacgtagcctcagggttc
cattatggcgttcacgcctgcgagggctgcaagggcttcttccggaggagcatccaacag
aacatccagtacaagaagtgccttaaaaacgagacctgctccatcatgcggatcaacagg
aaccgctgtcagcagtgccgctttaagaagtgcctgctggtaggcatgtccagagattct
gtgcggtttggccgtatccccaagcgggagaagcagaggatgcttctggaaatgcagagt
gccatgaacaacatgatgaacaacagccagctacacaaccagctccacggcaaccagacg
ccgtcggcgcctctcatcaacgcgtcgcccccctgtcccatggaggtcccagcggaagac
cctttgcctgctcccacttcctcctccttgccaggctcgtccccatgcagcagccaatcc
gaatccagcgctgacccaaagcccgagccttccatctccatggacaccagctcaaactcc
tcctcttcgtccagcggggctgatagcggggaggaggaggtgattggcacgttgacgcgg
gcccaccaggagacctttatgtacaaccaggagcagggcagcccgtcggctgagccgcgg
cggtcgccaagcgccaccgagcgcatccacgacgacagcaagaccatggaggagaggcag
gatgcctggaacttcaggaacaacgttgccacggtaacaggccacaacaacaaactcacc
tccagctctcagcctgagatctccgaagggccccatgtgatggacaacactcccagtcac
tgcccggtgcagatgaccaacgctgcccctggtggccattgtcctgtcacaggacatggc
atgtcccatagagctacacacaacagagcgatgaccagcagcaatggcttcacaggacca
gcatggagagggggcaacagaatgtatctagtgtgtcccatgaacacctccccctacgtg
gacccgcagaagtcaggccacagcatctgggaggatttctccatgagcttcaccccagct
gtgcgagaggtggtggagtttgccaagcgcatcccgggcttccaagacctctcccagcac
gaccaagtcagcctgctgaaagctggcactttcgaggtcctggtagtccgctttgtgtca
ctgttcgacgtgaaggagcgcacggtgacgttcctgagcggtaagaagtatagcgtggag
gccctgcgctccatgggggctggagacctgctcaactccatgtttgacttcagcgagaag
ctgctggcactcaacctgagcgaggaggagatgagtcttttcaccgcagtggtgcttgtt
tctgcagatcgatctggcatcgagaatgtaaactcagtggaggcgcttcaggagaccctg
atccgcgcgctgcgcagtctcgtcaccaagaaccaccccaacgaggccaccatcttcacc
aagctgctgctcaagctgcccgacctgcgctccctcaacaacatgcactcggagcagctc
ctcgccttcaaggtccacccatga
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