KEGG   Clupea harengus (Atlantic herring): 105903729
Entry
105903729         CDS       T09045                                 
Symbol
itgb8
Name
(RefSeq) integrin beta-8
  KO
K06591  integrin beta 8
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04510  Focal adhesion
char04512  ECM-receptor interaction
char04514  Cell adhesion molecule (CAM) interaction
char04518  Integrin signaling
char04810  Regulation of actin cytoskeleton
char04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    105903729 (itgb8)
   04514 Cell adhesion molecule (CAM) interaction
    105903729 (itgb8)
   04518 Integrin signaling
    105903729 (itgb8)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    105903729 (itgb8)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    105903729 (itgb8)
   04810 Regulation of actin cytoskeleton
    105903729 (itgb8)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:char04147]
    105903729 (itgb8)
   04515 Cell adhesion molecules [BR:char04515]
    105903729 (itgb8)
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   105903729 (itgb8)
Cell adhesion molecules [BR:char04515]
 Integrins
  Integrin beta subunits
   105903729 (itgb8)
SSDB
Motif
Pfam: Integrin_beta EGF_integrin PSI_integrin EGF_Teneurin EGF_2 EGF_TEN vWA_SIBA-E EGF_Tenascin
Other DBs
NCBI-GeneID: 105903729
NCBI-ProteinID: XP_012686969
Ensembl: ENSCHAG00000022224
UniProt: A0A6P3W1K3
LinkDB
Position
19:19835156..19858117
AA seq 788 aa
MTSWLRKYTNFILHRKLLISLLIVFISISQTAADGACASPYVSSCEECLLRGPDCGWCIQ
EDFLDGAHVSQRCDSTSSLLRKGCREEFIQSPRVKVEVDATLSSTQVAPRKISIQLRPGS
QASFVVEVRQLERYPVDLYYLVDVSASMKDNLERLNNVGVALSHQMREHSSDFRVGFGSF
VDKPVAPYISVHPSKIINPCREYEVQCRPTHGFIHVLPITENMTEFTRVIQQQRISGNMD
TPEGGFDAMLQAAVCQKDIGWRAEAKHLLLMMTDQPSHLALDSKLAGIVVPHDGQCHLED
NTYTETTNMEHPTIGQLADILLQNSIYSIFAVDNVQYKWYEDLLDLLPGAYLGRLFPKAT
NLKDLVVDAYKKLLSEVEIEVTVDHRHAHRFWVNVTAICPPGSSVTGNNKCSNLKPKQKV
FFNITVGMTSCPGEDSEEDNDVGLSVQPVGFNESVTVTMKQACSCQCSQRGGCLDDGVAS
TCNDISENTEQVSPDVCQPEGSGKICNGRGTCVCGECVCDHSNLGTIYGKFCEMDDFSCP
YQEGLLCGGRGQCTLGECVCQAGWTGESCGCPASTETCQSSDGLLCSGRGRCACGRCLCD
HPPYSGEFCEKCPTCYTACQPHWLCVACHLTHGLVQGSSEQCNRTCAPVVGYVDDITEMA
SVLGKHCLYPSTERCHYRFHIGVEPGSPQLQISRQPECLSSQRYFVTFLSVFLLTVVLGL
GILAVLRIMLRRKEEAQPDPQNPQFDTNKKDPSYAPTTNEKTVTYRRDHNVEMHVQVPKM
PLDDIGWQ
NT seq 2367 nt   +upstreamnt  +downstreamnt
atgacttcctggctgcgtaaatacactaactttattctgcatcgcaagctgctcatctca
ctgctcattgtttttatcagcatctctcaaacggcggcagacggcgcttgtgcatcgccc
tacgtctcgtcatgtgaagagtgcctgcttcgaggcccagactgcggctggtgtattcaa
gaggacttccttgatggagcacatgtgagccagcggtgtgattcgacctctagcctgctc
aggaagggctgtcgggaggagttcatccagagtcctcgggtgaaggtggaggtggacgct
acgctcagcagcactcaggtggctcccagaaagattagcatccagctacggccaggcagc
caggccagttttgtggtggaggtgcggcagctggagaggtaccctgtggacctgtactat
ctggtggacgtctcagcctccatgaaggacaacctggagcgtctgaacaacgtgggcgta
gcactgtctcaccagatgcgtgaacactccagcgacttccgtgtgggcttcggctcattc
gtggacaaaccggtggcgccgtacatcagcgttcacccgtcaaaaatcatcaacccctgc
agggagtatgaggtccagtgtcgcccgacgcacggcttcatccacgtccttcctatcacc
gagaacatgaccgagttcacacgtgtcatccagcagcagaggatctctgggaacatggac
acccccgagggcgggttcgatgccatgctccaggccgctgtctgccagaaggacatcggt
tggagggctgaggcgaagcatctgctcctcatgatgaccgaccagccgtcccacctggcc
ctcgacagtaagctggcgggcatcgtggtgccgcacgatggccagtgccacctggaggac
aacacctacaccgagacgaccaatatggaacacccaaccattggccagctggcggacata
cttctgcaaaacagcatatactcgatattcgctgtggacaatgtgcaatataagtggtat
gaggatctgcttgacttgctgccaggggcctatcttggcaggttgttcccaaaagcgaca
aacctgaaggatctggtcgttgacgcctacaagaagctgctgtctgaggtggagatcgag
gtgacggtggaccacagacacgcccatcgtttctgggtgaacgtgaccgccatctgcccc
cccggctccagcgtgacgggcaacaacaagtgctccaacttgaagccaaagcagaaggtg
ttctttaacattacagtggggatgactagctgccctggtgaggattccgaagaggacaat
gacgttgggctgtcggtgcagcctgtgggcttcaacgagtctgtcaccgtgacgatgaaa
caagcctgtagctgtcagtgcagccagaggggcggttgcctcgatgacggggtcgccagt
acctgcaacgacatcagcgaaaacacggagcaggtgtctccagatgtgtgccagccagaa
ggttccggaaagatctgcaacgggaggggcacctgtgtgtgtggggagtgtgtgtgtgac
cacagcaacctgggcaccatctacgggaaattttgcgaaatggatgacttctcctgcccc
taccaggaaggcctgctttgcggaggtcgtggacagtgtacgctgggagagtgcgtttgc
caagcaggctggacaggtgagagttgcgggtgcccggcgtccacagagacgtgccagtcg
agcgatggcttgctctgcagcggtcggggcaggtgtgcttgcggccgctgcttgtgcgac
caccccccgtattctggagagttctgtgagaagtgccccacctgttacaccgcatgtcaa
ccacattggttgtgcgtagcctgccatctgacacatggcctggtccaggggagttcagag
cagtgcaacaggacctgcgcccccgtggtcggctacgtcgatgacatcacagagatggcg
agcgtgctggggaagcactgcctgtaccccagcactgaacgctgccactacaggttccac
attggcgtggagcccggcagcccacagctgcagatcagcagacagccagagtgcttatca
agccagcggtactttgtgaccttcctgagtgtgttcctcctgactgtggtgctgggtctg
ggcatcctggcggtgctcaggattatgcttcggcgcaaggaggaagcccagccggacccc
cagaacccgcagtttgacaccaacaagaaggacccttcctacgctccaactacgaatgag
aagaccgtcacataccgacgagaccacaacgtggagatgcacgtgcaggtgcctaagatg
cccctcgatgacattggatggcagtaa

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