Clupea harengus (Atlantic herring): 105903763
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Entry
105903763 CDS
T09045
Symbol
cadm1b
Name
(RefSeq) cell adhesion molecule 1b isoform X1
KO
K06781
cell adhesion molecule 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105903763 (cadm1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105903763 (cadm1b)
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
Nectin family
105903763 (cadm1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
C2-set_2
V-set
C1-set
C2-set_3
Mid2
Adhes-Ig_like
Motif
Other DBs
NCBI-GeneID:
105903763
NCBI-ProteinID:
XP_031439982
Ensembl:
ENSCHAG00000013926
UniProt:
A0A6P8GX00
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Position
17:16918290..17007332
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AA seq
426 aa
AA seq
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MLLFLLFLVLMLLSSFFLPPPTPPSPSQGAAQTTSAQGQNLVTDNVSVVEGETATISCRV
KNNDDSVIQLLNPNRQTIYFRDVRPLKDSRFQLVNFSDNELRVSLSNVSLSDEGRYVCQL
YTDPPQEAYADITVLVPPGNPIIESREDVVREGNETEISCTTMGSKPAASITWLKGDQEL
QGESTVEETYDRMYTVTSRLTLTVSKEDDGVPVVCVINHPAVKDFLAQKYLQVQYKPEVK
IVVGYPEGLTREGENLELTCKAKGKPQPHRINWFKVDDDVPSHAVVTGSDLFIENLNKSY
NGTYRCVASNLVGDAFDDYILYVYDALTSTPTPTTTTITSDNSQDSRAGVGSPQKIDHAV
IGGVVAVVVFIMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGHSNSDN
KKEYYI
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcttctctttcttctctttcttgttctaatgcttctctcctctttttttctccccccc
cccaccccaccctcgccttcccaaggagcggctcagactacgtcagcacaaggacagaat
ctggtgacggataacgtgtcggtggtggaaggggagacggcaaccatcagctgcagggtg
aagaacaacgatgactccgtcatccagctactcaaccccaacagacagaccatctacttt
agagatgttagacctctgaaggacagtcgtttccagcttgttaacttctcagacaacgag
ctgcgagtgtcgctgtccaatgtgtctctgtcggacgagggccgctacgtgtgccagctc
tacacagaccccccacaggaggcctacgcagacatcaccgtgctggtccctccaggaaac
cccatcattgagtcgcgggaggacgtggtgagggagggcaacgagacggagatcagctgc
accaccatgggcagcaagccggccgcctccatcacctggctcaagggagaccaggagctg
caaggtgagtcgacggtggaggagacctacgaccggatgtacaccgtcaccagccgcctc
acgctcaccgtctccaaggaggacgacggagtgcccgtggtctgcgtcatcaaccaccca
gccgtgaaggacttcctggcccagaagtacctgcaagtgcagtataaacccgaggtgaag
atcgtggtgggctacccagaggggctgaccagggagggagaaaacttggaactgacctgc
aaagccaaagggaaacctcagcctcaccgcattaactggtttaaagtggacgacgatgtg
ccgtctcacgccgtcgtcaccggctcagacctcttcatcgagaacctcaacaagtcctac
aacggcacgtaccgctgcgtggcgtccaatctggtcggggacgccttcgatgactacatc
ctctatgtctatgatgctctcacctcaacccccactcccaccactactaccatcacctct
gacaactcccaagactctcgagccggagtgggatctccacagaagatcgaccatgccgtg
attggaggggtggtggccgtggtcgtcttcatcatgctctgcctcctcatcatcttaggc
cgctacttcgccagacataaaggcacctacttcactcatgaagccaaaggagctgacgac
gcagcagacgccgacacggccatcatcaacgccgagggcggccacagcaactccgacaac
aagaaggagtactacatctaa
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