Clupea harengus (Atlantic herring): 105903801
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Entry
105903801 CDS
T09045
Symbol
ppp2r1bb
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03015
mRNA surveillance pathway
char04110
Cell cycle
char04114
Oocyte meiosis
char04261
Adrenergic signaling in cardiomyocytes
char04350
TGF-beta signaling pathway
char04382
Cornified envelope formation
char04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105903801 (ppp2r1bb)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105903801 (ppp2r1bb)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
105903801 (ppp2r1bb)
04114 Oocyte meiosis
105903801 (ppp2r1bb)
09144 Cellular community - eukaryotes
04530 Tight junction
105903801 (ppp2r1bb)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
105903801 (ppp2r1bb)
09158 Development and regeneration
04382 Cornified envelope formation
105903801 (ppp2r1bb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105903801 (ppp2r1bb)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105903801 (ppp2r1bb)
03036 Chromosome and associated proteins [BR:
char03036
]
105903801 (ppp2r1bb)
Protein phosphatases and associated proteins [BR:
char01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
105903801 (ppp2r1bb)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
105903801 (ppp2r1bb)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
105903801 (ppp2r1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
HEAT_EZ
Vac14_Fab1_bd
Htt_N-HEAT_1
Cnd1
PDS5
Adaptin_N
SCD
CLASP_N
M11L
HEAT_ECM29
ARM_ARMC5
DUF3730
Motif
Other DBs
NCBI-GeneID:
105903801
NCBI-ProteinID:
XP_012687052
Ensembl:
ENSCHAG00000013110
UniProt:
A0A6P3W1G1
LinkDB
All DBs
Position
17:complement(16598672..16612728)
Genome browser
AA seq
589 aa
AA seq
DB search
MAGADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRTELLPFLTDTIY
DEDEVLLALAEQLGNFTMLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRKISQEHS
PVDLEVHFEPLVKRLASGDWFTSRTSACGLFSVCYPRVSSTVKAEIRQHFRTLCSDDTPM
VRRAAASKLGEFAKVLELEYVKSDIISLFTALASDEQDSVRLLAVEACVSIATLLPQEDL
EALVMPTLRQAAEDKSWRVRYMVADKFSELQTAVGPEITKNDLVPAFQNLLKDCEAEVRA
AAANKVKEFCENLPEDGRETIIMTHLLPCVKELVTDTNQHVKSALASVIMGLSTILGKDN
TVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVR
LAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATTNLKKLVEKFGPEWAQN
TIVPKVLGMAHDPNYLHRMTTLFCVNSLSEVCGQDITTKHMLPVVLKMAVDQVANVRFNV
AKCLQKIGPVLDSNSLQTEVKPVLEKLATDQDMDVKYFALEAISVLVLA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagctgatggagacgattcgctttacccaatagccgttttaatcgacgagctt
cgaaatgaagacgtccagttacggctgaacagcattaagaagctgtccaccatcgcgttg
gcgttaggagtggagcggacccgcacggagctgcttcccttcctcactgacaccatctac
gatgaagatgaggtcctgctggccttggctgagcagctgggcaacttcaccatgctggtg
ggcggcccagagtatgtccactgcctcctgccccccctggagagcctggccacggtggag
gagacggtggtgcgcgacaaggccgtggagtccctgcgtaagatctcccaggagcactcc
cccgtggacctggaggtgcactttgagcctctggtgaagaggctggccagcggagactgg
ttcacctcccgcacctccgcctgcggtctcttcagcgtctgctacccccgcgtctccagc
accgtcaaggctgagatcaggcaacatttccgcaccctgtgctctgatgacacacctatg
gtgaggcgtgcggccgcctccaagctgggagagttcgccaaagttctggagctggagtac
gtcaagagcgacatcatctccctcttcaccgcgctggcctctgatgagcaggactcggtg
cgtctgctggccgtggaggcgtgcgtgagcatcgccacgctgctgccccaggaggacctg
gaggcgctggtcatgcccaccctgcgccaggctgccgaggacaagtcctggagggtgcgc
tacatggtggccgacaagttctctgagttgcaaacggcagttgggcctgagatcaccaag
aatgacctggtccccgccttccagaaccttctgaaggactgcgaggctgaggtccgtgca
gctgctgccaataaggtcaaagagttctgtgagaatttgccagaggatggcagggagacc
atcatcatgactcacctcctgccctgtgtgaaggagctggtgactgacacgaaccagcac
gtgaagtctgcgctagcgtccgtcatcatgggcctgtccaccatcctggggaaagacaac
accgtggagcacctgctgcccctcttcctggcccagctcaaggacgagtgccctgaggtg
cgtctgaacatcatctccaacctggactgtgtgaacgaggtgattggcatccgccagctg
tcccagtccctgctgcccgccatcgtggagctggccgaggacgccaagtggagggtgcgg
ctggccatcatcgagtacatgcccctcctggcagggcaactgggtgtggagttcttcgat
gagaagctcaactccctctgcatggcctggctcgttgaccatgtgtatgccatccgtgag
gctgccaccacaaacctgaagaagctggtggagaagtttgggccggagtgggcacagaat
accatcgtgcccaaagtcctgggcatggcccacgaccccaactacctgcaccgcatgacc
acgctgttctgcgtcaattccctgtcggaggtgtgtggccaggacatcaccactaagcac
atgctcccagtggtgctcaagatggccgtggaccaggtggccaacgtgcgcttcaatgtg
gccaagtgtctgcagaagatcggacccgtcctggacagcaactccctgcagacggaggtg
aagccagtgctggagaaactggccacagatcaagatatggacgtcaagtacttcgccctg
gaggccatcagcgttctggtcctggcctga
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