Clupea harengus (Atlantic herring): 105903872
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Entry
105903872 CDS
T09045
Symbol
nr3c1
Name
(RefSeq) glucocorticoid receptor isoform X1
KO
K05771
glucocorticoid receptor
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105903872 (nr3c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105903872 (nr3c1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
char03310
]
105903872 (nr3c1)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
105903872 (nr3c1)
Nuclear receptors [BR:
char03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
105903872 (nr3c1)
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Gene cluster
GFIT
Motif
Pfam:
GCR
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
105903872
NCBI-ProteinID:
XP_012687130
Ensembl:
ENSCHAG00000021359
UniProt:
A0A6P3W1N7
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Position
20:complement(7082146..7106501)
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AA seq
827 aa
AA seq
DB search
MHQEMDQGGVKNSTKRDEHLIKLDFNESPADGALRNGGLGAMSLAPTSLVPPSSPLMQPV
SGDVPNGLCNSPLPEEYTTAVTTSLGFYGEEADHKVAGKDQRAQQGLQHQPLGLYTTGET
FSHLEASIADLNRSSASMDSLIGGADPSLFHLKTEDFSPMDKGDMDMDQDSFGPMGKDID
IGNHKLFNDNTLDLLQDFELTGSPSDFYVADDAFLSSLAEDSLLSDVSTDRETKLASSLG
PGSGSGGGGGNTPASSTSGSLVVNGARPEPLFTSPPSSSPAGASCSSSSSGIGSASSTPA
ISPALVKVEKDSVLTLSTPGVIKQEKASGVAGRSYCQMGGTVGLATSASISICGVSTSSG
QSFHFGGTAATATATPSSPQQKEQKVFSLYPALGPAGGEGWNRARPGFGEAGQQQRAGDG
LGGSQGFPSNNYARSDSTGSVSGQKPGGAAHKICLVCSDEASGCHYGVLTCGSCKVFFKR
AVEGERSAASATKGQHNYLCAGRNDCIIDKIRRKNCPACRFRKCLQAGMNLEARKTKKLN
RLKGVQQQQPAAAVAVSELSPPVMPEARPLVPKAMPQLVPSMLSLLKAIEPETIYAGYDS
TLPDTSTRLMTTLNRLGGRQVVSAVKWAKSLPGFRNLHLDDQMTLLQCSWLFLMSFGLGW
RSYQQCDGNMLCFAPDLVINEERMKLPYMADQCEQMLKISNEFVRLQVSNDEYLCMKVLL
LLSTVPKDGLKSQSVFDEIRMSYIKELGKAIVKREENSSQNWQRFYQLTKLLDSMHDMVG
GLLNFCFYTFVNKSLSVEFPEMLAEIISNQLPKFKAGSVKPLLFHQK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaagagatggatcaaggaggagtgaaaaacagcaccaagagagatgaacacttg
atcaagttggactttaacgagagccctgccgacggagccctgcggaacggtgggctaggc
gccatgtcactggcccccacctctcttgtgcccccgtccagcccactcatgcagcctgtg
tccggagacgtgcccaacggcctctgcaactccccactgcccgaggagtacaccacagct
gtgaccacttccctgggcttctacggggaagaggccgaccacaaagtggcaggcaaggat
cagcgggcccagcagggcctccagcaccagcccctgggcctgtacactacaggcgagacc
ttctcacacctggaggccagcattgcggacctgaaccgctcctcggcatccatggactct
ctgattggcggcgcagaccccagcctctttcacctgaagacggaggacttctcccccatg
gacaaaggggacatggacatggaccaggactcgtttggtcctatgggcaaagacatagac
ataggcaaccacaagctgttcaacgacaacacgctggacctgctgcaggacttcgagcta
acaggctcgccctcggacttctacgtggccgatgacgctttcctgtcttccctggccgag
gactcgctgctgtcggacgtgagcaccgacagggagaccaaactggcgagcagcctgggg
cccggctcgggaagtggaggcggcggcggaaacacgcccgcctccagcacaagcggcagc
ttggttgtaaacggggcgcgtccggagccgctgttcaccagcccacccagcagctctccg
gccggagcctcttgcagcagcagcagcagcggcatcgggagtgcctcgtccaccccggcc
atcagccccgcgctggtgaaggtggagaaggactcggtgctgacgctgtccacaccgggc
gtcatcaagcaggagaaggccagcggtgtggccgggcgaagctactgtcagatgggtggg
actgtgggtctagccacctctgcctccatctccatatgtggcgtgagcacctccagcggc
cagagcttccacttcgggggaaccgccgccacagccacggccacgccctccagcccccag
cagaaggagcagaaggtgttcagcctgtaccctgccctggggcctgcgggaggagagggc
tggaacagggcgaggccggggttcggagaagcggggcagcagcagagggccggcgacggt
ctcggcggatcacaggggttcccctccaacaattacgccaggtcagactccaccggcagt
gtgtcggggcagaagccgggcggcgcggcccataagatctgcctggtgtgctcggacgag
gcctcgggatgccattacggggtgctcacctgcggcagctgcaaggtcttctttaaacgg
gctgtggaaggtgagcgctcagcagcgtccgctaccaaagggcagcacaactacctgtgc
gccggacggaacgactgcatcatagacaagatccgccgcaagaactgcccagcttgccgc
tttcgcaagtgtctgcaggcaggcatgaacctggaagctcgtaaaacgaagaagctaaat
cgtttaaagggcgtccagcagcagcagccggcggcggcggtggcggtgagcgagctgtct
cccccggtgatgcccgaggcgcggccgctggtgcccaaagccatgccccagctggtgccg
tccatgctgtcgctgctcaaggccatcgagccggagaccatctacgccggctacgacagc
acgctgcccgacacctccacgcgcctcatgaccacgctgaaccggctcgggggccgccag
gtcgtctccgctgtcaagtgggctaaatccctgccagggttccggaaccttcacctggat
gaccagatgaccctgctccagtgctcgtggctcttcctcatgtcattcgggctggggtgg
cgctcctaccagcaatgcgatggcaacatgctgtgctttgcccctgacctggtcatcaat
gaggaacgcatgaagctgccctacatggccgaccagtgtgagcagatgctgaagatttcc
aacgagtttgtgcgtctgcaggtgtccaacgatgagtacctgtgcatgaaggtcctcttg
ctgctcagcactgtgccgaaggatggcctgaaaagccagtcggtgttcgacgagatccgg
atgtcctacatcaaggagctcgggaaagccatagtgaagcgggaggagaattccagccag
aactggcagaggttctaccagctcaccaagctactggactccatgcacgacatggtgggc
ggcctgctgaacttctgcttctacacctttgtcaacaagtctctgagcgtggaattcccc
gagatgttggcagagatcatcagcaaccagttaccaaaattcaaagccggaagcgtcaag
ccgctgctctttcaccagaagtga
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