Clupea harengus (Atlantic herring): 105903911
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Entry
105903911 CDS
T09045
Symbol
cyfip2
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04810
Regulation of actin cytoskeleton
char05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
105903911 (cyfip2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105903911 (cyfip2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105903911 (cyfip2)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105903911 (cyfip2)
Factors involved in mRNA localization
Other mRNA localization factors
105903911 (cyfip2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Spore_SspJ
zf-CW
Cypovirus_WIV_4
Motif
Other DBs
NCBI-GeneID:
105903911
NCBI-ProteinID:
XP_031442629
Ensembl:
ENSCHAG00000023436
UniProt:
A0A6P8GTZ2
LinkDB
All DBs
Position
20:complement(8174858..8207222)
Genome browser
AA seq
1266 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLGKIDKYFK
VVPLFGDMQIELSRYIETSAHYEENKSKWTCTQSAVSPQYNLCEQMGQIRDDHIRFISEL
ARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSTHVMEVPHWLFVCDPGPKH
LENYSWKLVHPTDKFCNKDCPGTAEEYERATRYNYTSEEKFAMVEVIAMIKGLQVLMGRM
ESVFNQAIRNTIYAALQDFAQMTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGAREPP
NDPCLKGEKDPKGGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPI
VQAIEDFHKSSFFYTHLLNFSEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWIL
TDHILETKEPSMMEYVLYPLDLYNDSGYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLAD
QIFAYYKAMAGSVLLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLI
TQRISAAMYKSLDHAISRFESEDLTSIVELDWLLEVNRLTHRLLCKHMTLDSFDAMFREA
NHNVSAPYGRITLHVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYL
YGSKPLNIAYSHIYSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQY
VKTLIEVMPKICRLPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCL
LIEQALSQEEVCDLLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGT
PQQIAIAREGDLLTKERLCCGLSMFEVILTRIRSFLQDPVWRGPPPTNGVMHVDECMEFH
RLWSAMQFVYCIPVGTHEFTAEQCFGDGLNWAGCAIIVLLGQQRRFDLFDFCYHLLKVQR
QDGKDEIIKNVPLKKMADRIRKYQILNNEIFAILNKYMKAVETDSSTVEHVRCFQPPIHQ
SLATTC
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgacaacccacgtgaccctggaggatgcgttgtccaatgtggacctgctggaggagctg
cccctccccgaccagcagccatgcatcgagcccccgccctcctccatcatgtaccaggct
aactttgacaccaacttcgaagacaggaatgcgtttgtcactgggatcgcccgctacatc
gaacaggccactgtgcactccagcatgaatgagatgctggaggaggggcatgagtatgcg
gtcatgctctacacctggaggagctgctccagagctatacctcaggtgaagtgcaacgag
cagcccaaccgggtggagatctacgagaagactgtggaggtgctggagcccgaggtcacc
aagctcatgaagttcatgtacttccagcggaaagccattgagcgtttctgcagcgaggtg
aagcgtctgtgccacgccgagcgccggaaggactttgtgtcggaggcctacctgctgacg
ctgggcaagttcatcaacatgtttgccgtgctggacgagctcaagaacatgaagtgcagc
gtcaagaacgaccactccgcctacaaacgagctgctcagttcctcagaaaaatggccgac
ccacagtccatccaggagtcacagaacctctccatgttcctagccaatcacaacagaatc
acacagtgtctgcatcagcagctggaggtgatccctggctatgaggagctgctagctgac
attgtcaacatctgtgtggactactacgagaataaaatgtacctgacgcccagtgagaaa
cacatgctgctcaaggttatggggttcggcctttaccttatggatgggaacgtcagcaac
atctacaagctggatgccaagaagaggataaacctgggcaaaattgacaagtattttaag
gtggtacccctattcggcgacatgcagattgaactctcacgctacattgaaactagtgcc
cactatgaggagaacaagtccaagtggacatgcacgcagagtgccgtcagcccccagtac
aacctgtgtgagcagatgggtcagatccgtgacgaccacatccgcttcatctcggagctg
gcgcgctacagtaacagcgaggtggtgacgggctcgggcctggacagccagaagtcggac
gaggagtaccgcgagctgttcgacctggcgctgcgcggcctgcagctgctgtccaagtgg
agcacgcacgtgatggaagtgccacactggctatttgtttgtgatccaggtccaaaacac
cttgaaaattactcgtggaagctggtgcaccctaccgacaagttctgcaacaaggactgc
cccggcacggcggaggagtacgagcgcgccacgcgctacaactacaccagcgaggagaag
ttcgccatggtggaggtcatcgccatgatcaagggcctgcaggtgctcatgggccgcatg
gagagcgtcttcaaccaggccatccgcaacaccatctacgccgcgctgcaggacttcgcc
cagatgacgctgcgcgaaccgctccgccaggccgtgcgcaagaagaagaatgtgctcatc
agtgttcttcaggctatccgtaaaactatctgtgactgggagggggcgagggagccccct
aatgacccctgcctgaagggggagaaggaccccaaaggaggcttcgacatcaaagtaccc
cgcagggcggtgggaccctcgagcacacagctgtacatggtgcgtaccatgctggagtcc
ctgatcgccgataagagcggctccaagaagaccctgcgcagcagtctggacggccctatc
gtgcaggccatcgaggacttccacaagagctccttcttctacacgcacctgctcaacttc
agtgaggcccttcagcagtgctgtgatctctcccagctgtggttccgggagttcttcctg
gagctcaccatgggccgccgcatccagttccccatcgagatgtccatgccctggatcctc
accgaccacatcctggagaccaaggagccttccatgatggagtatgtgctgtaccctctg
gatctgtataacgacagcgggtactacgccctgaccaagttcaagaagcagttcctgtac
gacgagattgaggctgaggtgaatctgtgtttcgaccagtttgtttacaagttggcagat
cagatatttgcttactacaaagccatggctgggagtgttctcctggacaagcgcttcagg
gcggagtgtaagaactatggcgtgattattccctaccctccctcaaaccgctacgagaca
ctgctgaagcagagacacgttcagctgctgggtcgctccatcgacctgaacaggctgatc
acgcagcgcatctcggccgccatgtacaagtctctggaccacgccatcagccgattcgag
agcgaggacctcacctccatcgtggagctggactggctgctggaggtgaaccgactgacc
caccggctgctttgcaagcacatgacgctggacagcttcgacgccatgtttcgcgaggcc
aaccacaacgtgtccgccccttacggccgtatcacactgcacgtcttctgggagctcaac
tttgacttcctccccaactactgctataatggctctactaaccggtttgtgcggacagcc
attccctttacacaggagcctcagagggacaaaccggccaacgtccagccttactacctg
tatggctccaagcctctgaacatcgcctactcccacatctacagctcctacaggaacttt
gtggggccgccacacttcaagacaatctgccgtctcctcggttaccagggcatcgccgtg
gtgatggaggagctgctcaagattgtcaaaagcttgctgcagggcaccatcctccagtac
gtgaagaccctgatcgaggtgatgcccaagatctgccgcctgccgcgccacgagtacggc
tccccaggcatcttggagttcttccatcaccaactgaaggacatcatagagtacgcagag
ctgaagacggacgtcttccagagcctgagggaggtgggcaacgccatcctcttctgcctg
ctcatcgaacaggctctgtcacaggaagaagtgtgtgacctccttcacgccgccccattc
cagaacattcttcccagagtctacatcaaagagggagagcgattggaagtgaggatgaag
aggttggaagcgaagtacgcccccctgcacctggtgcctctgattgagagactggggacc
ccacagcaaatcgccatcgcacgtgagggcgacctgctgaccaaggagcgcctgtgctgc
gggctgtccatgttcgaggtgattctgacccgcatccgcagcttcctgcaggaccccgtg
tggcgcgggccgccccccaccaacggcgtcatgcacgtggacgagtgcatggagttccac
cgcctctggagcgccatgcagtttgtgtactgcatccccgtgggaacgcacgagttcacc
gccgagcagtgctttggtgatgggttgaattgggccggctgcgccatcatcgtgttgctg
ggacaacagcgccgctttgacctctttgatttctgctaccatcttctgaaagtccagcgg
caagatggcaaagacgaaatcatcaagaacgtgcccttgaagaaaatggccgaccgcatc
aggaagtaccagatcctcaacaacgagatcttcgccatcctcaacaagtacatgaaggcc
gtcgaaacagacagttccacggtagagcatgtgcgctgtttccagcctcccatccaccag
tccctggccaccacctgttga
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