Clupea harengus (Atlantic herring): 105903964
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Entry
105903964 CDS
T09045
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04310
Wnt signaling pathway
char04520
Adherens junction
char04916
Melanogenesis
char05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
105903964 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
105903964 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
105903964 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105903964 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105903964 (lef1)
Transcription factors [BR:
char03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
105903964 (lef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
105903964
NCBI-ProteinID:
XP_031415636
Ensembl:
ENSCHAG00000027834
UniProt:
A0A6P8ETT9
LinkDB
All DBs
Position
22:complement(3329677..3369035)
Genome browser
AA seq
397 aa
AA seq
DB search
MPQLAGGGGGGDPELCATDEMIPFKDEGDPQKEQIFAEINHSEEEGDLDEIKSSLVNETE
TSPHSNNHDCTSYGEIRWKTGPNPLAGRHSQIIQDSYHEKLRDHTDDGKHQDMYNKGHPY
SGYPGYIMMNMNNDSYMNNGSLSPPMPRTSNKVPVVQPSHAIHPLTPLITYSDEHFAPGP
HSGHHPQDMNIKSHQGMQRHHQQDIPNFYPLSPGGVGQITPPLGWFSHHMVPGPPGPHAT
GIPHPAIVNPQVKHEPHHETDLMHMKPQHDQRKEQEPKRPHIKKPLNAFMLYMKEMRANV
VAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKK
RKREKMQEQATGGKRNAFSTCKAKAAATGPLLEMEAC
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgccacagttagccggtggaggaggcggcggggacccggagctctgcgccaccgacgaa
atgattcccttcaaagacgaaggagacccacagaaagaacagatattcgcagagattaac
cactcggaagaagaaggggacttggatgaaatcaagtcctctttagtcaatgagacggag
acaagcccacacagtaacaatcatgattgcaccagctatggtgagatcagatggaaaaca
ggacccaaccctctggcaggtagacactcccagataatccaagactcgtaccatgaaaag
ctcagagaccatacagatgatggcaagcatcaagacatgtacaacaaagggcacccatac
tctggctatccaggctacatcatgatgaacatgaacaacgactcgtacatgaacaacggc
tcactctcaccacccatgcccagaacgtcaaacaaggtgccagtggtgcagccgtcccac
gccatccatcccctcacccccctcatcacgtacagcgatgagcacttcgctccgggcccc
cactctggacaccacccccaggacatgaacatcaagtcacatcaaggtatgcagaggcat
catcaacaagacattcccaacttctatcccttgtccccgggaggagttggacagatcact
cccccactgggatggttttcccaccacatggttccaggtccccctgggccccacgcaaca
ggcatccctcaccctgctatcgttaacccacaggtcaaacacgagccccaccacgagacc
gacctgatgcacatgaaacctcagcacgaccagagaaaagagcaagagcccaaaagacct
cacatcaagaaacctctaaacgctttcatgctgtatatgaaagagatgcgggccaacgtg
gtggccgagtgtacgctgaaggagagcgccgccatcaaccagatcctggggaggaggtgg
catgctttatctcgggaagagcaagctaagtattacgaattagcccgcaaggaacggcag
ctccacatgcagctctacccaggctggtccgccagagacaattatggaaagaagaagaag
cggaagcgggagaagatgcaggaacaggccacaggagggaaacggaatgcgttctctaca
tgtaaggcgaaggctgcagctacaggcccccttttagagatggaagcctgctaa
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integrated database retrieval system
