Clupea harengus (Atlantic herring): 105904033
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Entry
105904033 CDS
T09045
Symbol
fzr1a
Name
(RefSeq) fizzy-related protein homolog
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04110
Cell cycle
char04120
Ubiquitin mediated proteolysis
char04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105904033 (fzr1a)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
105904033 (fzr1a)
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
105904033 (fzr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105904033 (fzr1a)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
105904033 (fzr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
eIF2A
NBCH_WD40
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Ge1_WD40
ELYS-bb
Motif
Other DBs
NCBI-GeneID:
105904033
NCBI-ProteinID:
XP_012687309
Ensembl:
ENSCHAG00000019246
UniProt:
A0A6P3W1S6
LinkDB
All DBs
Position
22:complement(1804200..1814904)
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AA seq
495 aa
AA seq
DB search
MDQEYESRLLRQINIQNDNASPIKVTEVMRALTPTNSPLSSPSKHGDRFIPSRAGANWSV
NFHRINENEKSQNQNRKTKDGTSDNSKADGLAYSALLKNELLGAGIEKVQDPQTEDRRLQ
PSTPEKRSLFSYSLSAKRSLPDDGNSVSPYSLSPVSSNSQKLLRSPRKPTRKISKIPFKV
LDAPELQDDFYLNLVDWSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGWS
ERGNLVAVGTHKGFVQIWDAAAGKKLSVLEGHTARVGALAWNVDQLSSGSRDRLILQRDI
RAPPLQSERRLQGHRQEVCGLKWSTDHQLLASGGNDNKLLVWNHSSVLPVQQYTEHLAAV
KAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCTDTGSQVCNLAWSKHTNELVSTH
GYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKMRS
TKESISVLNLFTRIR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggagtacgagagtcgactgttaagacagatcaacattcagaatgacaatgcc
agcccaattaaggtgactgaggtcatgagagcactgaccccgaccaactcccctctctcc
tctcccagtaagcacggggaccgctttatcccctctcgagcaggggccaactggagtgtg
aacttccatcgcataaatgaaaatgagaagtcccaaaatcagaacaggaagacaaaagat
ggcacatcagacaacagcaaggccgatggcctggcatactctgccctgctgaagaacgag
ctgctgggcgcgggcattgagaaggtgcaggacccccagaccgaggaccgccggctccag
ccctccaccccagagaagagaagcctcttcagttattctctcagtgccaagcgctcccta
ccagacgacgggaacagtgtatccccgtactctttgtcaccggtcagcagcaacagtcaa
aaactattgcggtcaccacggaaaccgaccagaaagatctccaagatcccgttcaaagtg
ctggacgcccctgaactgcaggatgatttctacctgaacctggtcgactggtcctctctc
aatgtgctcagcgtgggcctgggcacctgtgtgtacctgtggagcgcctgcaccagccag
gttacccgtctgtgtgacctatcagtggagggggattctgtgacgtcagtgggatggtca
gagaggggtaatcttgtggccgttggcacacacaaaggcttcgtacagatctgggatgct
gccgctgggaagaagctctctgtcctcgagggacacacggccagagtgggtgcgctagcg
tggaacgtggaccagctgtcgtcgggcagtcgggaccgcctgatcctgcagagggacatc
agggctcctccgctgcagtcggagcgcaggctgcagggccacaggcaggaggtgtgcgga
ctcaagtggagcaccgaccaccagctgctcgcctccgggggcaacgacaacaagctgctg
gtgtggaaccactcgagtgtgctcccggtgcagcagtacacggagcacctggcggcggtg
aaggccatcgcctggtcgccccaccagcacgggctgctggcatcgggcgggggcaccgcc
gaccgctgcatccgcttctggaacacgctgacgggccagccgctgcagtgcaccgacacc
ggctcccaagtctgcaacctggcctggtccaagcacaccaacgaactggtgagcacacac
ggctactcccagaatcagatcctggtgtggaagtacccctccctcacacaagtggccaag
ctgaccggtcactcctacagagtgctctatctggcaatgtcccctgacggagaagccatt
gtgaccggggccggagatgagactctgcgtttctggaatgtcttcagtaaaatgagatct
accaaggaatccatatcagttctcaacctcttcacaaggatccgataa
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