KEGG   Clupea harengus (Atlantic herring): 105904038
Entry
105904038         CDS       T09045                                 
Symbol
polr1e
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA49
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105904038 (polr1e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:char03021]
    105904038 (polr1e)
Transcription machinery [BR:char03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     105904038 (polr1e)
SSDB
Motif
Pfam: RNA_pol_I_A49
Other DBs
NCBI-GeneID: 105904038
NCBI-ProteinID: XP_012687316
Ensembl: ENSCHAG00000026854
UniProt: A0A6P3W3R2
LinkDB
Position
22
AA seq 415 aa
MAAARCTWKCCDEEKEDDNVVVLQFSNGDVKSTDQLDFKYYKNVLASNPRKRNRRILVAD
SDRLSYVGNNFGTGSLRCNSMCKYYVGVLDKSTMQMEVHSAQLFNMQPLIPGESMPAEDT
DIKKTYRHKVDSLIEAFGTNKQKRALSSRRNNQVGEDSLQQAVAQAASNIIEQKGLEVLQ
QEVADSEAVADTALYLPVCNPEADTEEGVYPFDELLSDVEYAALESVGKKMSELTSEDLL
SMREKGCPQTVMRLLEALPEDPEARDRQARCLWYLFLLMKLAHQKFISRKFGSEEDCPKI
ILNKVMKAFTVESFSHGRVKNVVASSMKVKLASYCLALLLHINHQTANLTRLYQDLGFYD
SRMVEVAKSMGLKLSKMPSEGADKAGYDEHRIATLKLPLIKYDRFTQTRKRKKVR
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggcggccgccagatgcacttggaagtgctgtgacgaggagaaagaagacgacaatgtt
gttgtcttacagttctcaaatggtgacgtgaagagtacagatcaactggatttcaaatat
tacaagaatgtccttgcaagcaacccaagaaaaaggaatcggcgtatcctggtggcggat
tcggacaggctgtcatacgtaggaaacaacttcggcacaggatccttgcgatgcaacagc
atgtgcaagtactatgtgggagtcctggataagtcaaccatgcagatggaggtacacagt
gctcaactgttcaacatgcagcctctcatcccaggggagtccatgccagcggaggatact
gacatcaagaagacttacagacataaggtggattccttgattgaggcatttggaacaaac
aaacagaagcgtgctctgagctcccgtcgaaacaaccaggtgggcgaggactccctgcag
caggccgtggcccaggcggccagcaacatcattgagcagaagggcttagaagtgctgcaa
caggaggtggcggattcagaggccgtggcggacacagcgctgtacctgcctgtgtgtaac
ccggaggcagacacagaggagggggtttatccatttgatgagctgctttctgatgtagag
tatgctgctctggagtccgttggaaagaagatgtctgagctcacctcggaggacctgctc
agcatgagggagaaaggctgtccccagacagtgatgcggcttttggaggcattgccagag
gatcctgaggctcgtgacagacaggcgagatgtctgtggtacctcttcctgctcatgaaa
ctagcacatcagaaattcatctcccgcaaatttggttctgaggaggactgtccaaagatc
atcttaaataaagtgatgaaggcctttacagtggaaagtttcagtcatggcagggtaaaa
aacgttgtggcttcctccatgaaagtaaaactggcctcatactgtctggctctgcttctg
cacataaaccaccagactgccaatctcacacgactgtatcaggacctgggcttctatgac
agcaggatggtggaggtggctaagtccatggggctgaagttgagtaaaatgccctcggaa
ggtgcggacaaggctgggtacgatgaacacagaatcgccaccctgaagctccctctcatc
aagtacgaccgatttacacagacaaggaaacgcaagaaagtccgataa

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