KEGG   Clupea harengus (Atlantic herring): 105904061
Entry
105904061         CDS       T09045                                 
Symbol
canx
Name
(RefSeq) calnexin isoform X1
  KO
K08054  calnexin
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04141  Protein processing in endoplasmic reticulum
char04145  Phagosome
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    105904061 (canx)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    105904061 (canx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:char03110]
    105904061 (canx)
   04131 Membrane trafficking [BR:char04131]
    105904061 (canx)
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:char04091]
    105904061 (canx)
Chaperones and folding catalysts [BR:char03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   105904061 (canx)
Membrane trafficking [BR:char04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Others
    105904061 (canx)
 Autophagy
  ER-phagy
   Other ER-phagy associated proteins
    105904061 (canx)
Lectins [BR:char04091]
 L-type lectins
  105904061 (canx)
SSDB
Motif
Pfam: Calreticulin PFF1_TM Connexin CCSMST1 Piezo_TM1-24 CLN3 DUF6080
Other DBs
NCBI-GeneID: 105904061
NCBI-ProteinID: XP_012687348
Ensembl: ENSCHAG00000020498
UniProt: A0A6P3W1T7
LinkDB
Position
20:complement(10368900..10388291)
AA seq 625 aa
MDLKVRLCLLLITLSWTVNLMSVSAQEEDEADVMDMDDGEVDIGDDILEGDAETEATDEA
PTEPPIPKVTYKAPEPMGEHFFAESFDKGTLEGWITSKAKKDGIDEEIAKYDGEWEVEDM
KDTKLPGDKGLVLKSRAKHHAISAWLLRPFNFDTMPLIVQYEVNFQTGIDCGGAYIKLLS
QTEDLNLDEFVDRTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGEYEEKHAKKSDSDLRSY
YTDKKTHLYTLVLNPDNTYEILIDQTVVNSGSLLTDVTPAVNPAAEVEDPDDHKPEDWDE
RPKIQDPDAVKPEDWDEDAPAKIADEDAVKPEGWLDDEAEYIGDPDAVKPEDWDEDMDGE
WEAPQVPNPACEAAPGCGKWEKPTIDNPSYKGKWKPPMIDNPNYQGVWKPRKVANPDYFE
DLHPFRMTTFSAVGLELWSMSSDIFFDNFFVTSDRNTAERWANDGWGLKKAAEGAADPGL
VKQMMTAAEERPWLWVVYVLTVALPVVLIIVFCCTGKKKPAAADYKKTDEPQPDVKEEAE
AEAAAEAEAEVEEDEEEAEAEEEEDVKQEEQTADKKSDLEDSPAEEGANDEDSPDGEEED
ADKSGEKPEEDILRRSPRNRKVRKE
NT seq 1878 nt   +upstreamnt  +downstreamnt
atggatctgaaggtgcggttatgtctgctgcttatcacactgagctggaccgtcaacctg
atgtccgtgagcgcccaagaagaggacgaggctgacgtcatggacatggacgacggggag
gtggacatcggagacgacatactcgagggagacgctgagacggaagcaaccgatgaagcc
cctaccgaaccccctataccaaaggtgacctacaaggctcctgaaccaatgggagaacac
tttttcgccgagtcattcgacaaaggaacacttgaaggatggattacgtcaaaggccaag
aaggacggaattgatgaggaaattgccaagtatgatggtgaatgggaagtggaggacatg
aaggacaccaagctacccggagacaaaggtctggtgctgaagtcccgtgccaaacaccat
gccatttcagcctggctgctgcgacctttcaactttgacaccatgcccctcatcgtccag
tatgaggtgaacttccaaacaggcattgactgtggcggtgcctacatcaaactgctctcc
cagactgaagatctgaacttggatgagtttgtggataggactccctacaccatcatgttt
gggcctgacaagtgtggcgaggactacaaactccatttcatcttcagacacaagaacccc
aagaccggcgagtatgaggagaagcacgccaagaagtccgactctgacctgcgttcctac
tacaccgacaagaagacccacctctacaccctggtgctgaaccctgacaacacctatgag
atcctgatagaccagacggtggtgaacagcggcagcctcctgactgacgtgacccccgca
gtcaaccccgccgcagaggtcgaggaccccgatgaccacaagcccgaggattgggacgag
aggcccaagattcaggaccccgacgcagtcaagccagaggactgggatgaggatgcccca
gctaagatcgctgatgaggatgctgtgaaacctgaaggctggctggatgacgaggcagag
tacatcggtgaccccgacgccgtcaaacccgaggactgggatgaggatatggatggcgag
tgggaggcgcctcaggttcctaaccccgcctgtgaggccgcccctggctgcggcaagtgg
gagaagcccacgatcgacaaccccagctacaagggcaaatggaagcctcccatgattgac
aaccccaactaccagggcgtgtggaagcccaggaaggtcgccaaccctgactacttcgag
gacctgcacccattccgcatgaccacgttcagcgctgtgggtctggaactctggtccatg
tcctcggacatcttcttcgacaacttctttgtcacttccgaccgcaacactgcagagcgc
tgggccaatgacggctggggcctgaagaaggcagctgagggagccgctgatcctggcctg
gtgaagcagatgatgactgccgcagaggagcgtccctggctctgggtggtctatgtcctc
accgtggctctccctgttgtgctgattatcgtcttctgctgcactggaaagaagaagccg
gcagctgcagactacaagaagacagatgagccccagcctgacgtgaaggaggaggctgaa
gctgaagctgcggctgaggctgaagctgaggtggaggaggatgaggaagaggcagaagca
gaggaggaggaagacgtaaagcaggaggaacagacagcggacaagaagagtgatttagag
gacagtcctgcagaggagggagcaaatgatgaagactccccagatggagaggaggaagac
gcagacaaatccggcgagaagccagaggaggatattctcagaaggtcccccagaaacaga
aaagtgcgaaaggaatga

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