Clupea harengus (Atlantic herring): 105904061
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Entry
105904061 CDS
T09045
Symbol
canx
Name
(RefSeq) calnexin isoform X1
KO
K08054
calnexin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04141
Protein processing in endoplasmic reticulum
char04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105904061 (canx)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105904061 (canx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
char03110
]
105904061 (canx)
04131 Membrane trafficking [BR:
char04131
]
105904061 (canx)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
char04091
]
105904061 (canx)
Chaperones and folding catalysts [BR:
char03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
105904061 (canx)
Membrane trafficking [BR:
char04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
105904061 (canx)
Autophagy
ER-phagy
Other ER-phagy associated proteins
105904061 (canx)
Lectins [BR:
char04091
]
L-type lectins
105904061 (canx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
PFF1_TM
Connexin
CCSMST1
Piezo_TM1-24
CLN3
DUF6080
Motif
Other DBs
NCBI-GeneID:
105904061
NCBI-ProteinID:
XP_012687348
Ensembl:
ENSCHAG00000020498
UniProt:
A0A6P3W1T7
LinkDB
All DBs
Position
20:complement(10368900..10388291)
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AA seq
625 aa
AA seq
DB search
MDLKVRLCLLLITLSWTVNLMSVSAQEEDEADVMDMDDGEVDIGDDILEGDAETEATDEA
PTEPPIPKVTYKAPEPMGEHFFAESFDKGTLEGWITSKAKKDGIDEEIAKYDGEWEVEDM
KDTKLPGDKGLVLKSRAKHHAISAWLLRPFNFDTMPLIVQYEVNFQTGIDCGGAYIKLLS
QTEDLNLDEFVDRTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGEYEEKHAKKSDSDLRSY
YTDKKTHLYTLVLNPDNTYEILIDQTVVNSGSLLTDVTPAVNPAAEVEDPDDHKPEDWDE
RPKIQDPDAVKPEDWDEDAPAKIADEDAVKPEGWLDDEAEYIGDPDAVKPEDWDEDMDGE
WEAPQVPNPACEAAPGCGKWEKPTIDNPSYKGKWKPPMIDNPNYQGVWKPRKVANPDYFE
DLHPFRMTTFSAVGLELWSMSSDIFFDNFFVTSDRNTAERWANDGWGLKKAAEGAADPGL
VKQMMTAAEERPWLWVVYVLTVALPVVLIIVFCCTGKKKPAAADYKKTDEPQPDVKEEAE
AEAAAEAEAEVEEDEEEAEAEEEEDVKQEEQTADKKSDLEDSPAEEGANDEDSPDGEEED
ADKSGEKPEEDILRRSPRNRKVRKE
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggatctgaaggtgcggttatgtctgctgcttatcacactgagctggaccgtcaacctg
atgtccgtgagcgcccaagaagaggacgaggctgacgtcatggacatggacgacggggag
gtggacatcggagacgacatactcgagggagacgctgagacggaagcaaccgatgaagcc
cctaccgaaccccctataccaaaggtgacctacaaggctcctgaaccaatgggagaacac
tttttcgccgagtcattcgacaaaggaacacttgaaggatggattacgtcaaaggccaag
aaggacggaattgatgaggaaattgccaagtatgatggtgaatgggaagtggaggacatg
aaggacaccaagctacccggagacaaaggtctggtgctgaagtcccgtgccaaacaccat
gccatttcagcctggctgctgcgacctttcaactttgacaccatgcccctcatcgtccag
tatgaggtgaacttccaaacaggcattgactgtggcggtgcctacatcaaactgctctcc
cagactgaagatctgaacttggatgagtttgtggataggactccctacaccatcatgttt
gggcctgacaagtgtggcgaggactacaaactccatttcatcttcagacacaagaacccc
aagaccggcgagtatgaggagaagcacgccaagaagtccgactctgacctgcgttcctac
tacaccgacaagaagacccacctctacaccctggtgctgaaccctgacaacacctatgag
atcctgatagaccagacggtggtgaacagcggcagcctcctgactgacgtgacccccgca
gtcaaccccgccgcagaggtcgaggaccccgatgaccacaagcccgaggattgggacgag
aggcccaagattcaggaccccgacgcagtcaagccagaggactgggatgaggatgcccca
gctaagatcgctgatgaggatgctgtgaaacctgaaggctggctggatgacgaggcagag
tacatcggtgaccccgacgccgtcaaacccgaggactgggatgaggatatggatggcgag
tgggaggcgcctcaggttcctaaccccgcctgtgaggccgcccctggctgcggcaagtgg
gagaagcccacgatcgacaaccccagctacaagggcaaatggaagcctcccatgattgac
aaccccaactaccagggcgtgtggaagcccaggaaggtcgccaaccctgactacttcgag
gacctgcacccattccgcatgaccacgttcagcgctgtgggtctggaactctggtccatg
tcctcggacatcttcttcgacaacttctttgtcacttccgaccgcaacactgcagagcgc
tgggccaatgacggctggggcctgaagaaggcagctgagggagccgctgatcctggcctg
gtgaagcagatgatgactgccgcagaggagcgtccctggctctgggtggtctatgtcctc
accgtggctctccctgttgtgctgattatcgtcttctgctgcactggaaagaagaagccg
gcagctgcagactacaagaagacagatgagccccagcctgacgtgaaggaggaggctgaa
gctgaagctgcggctgaggctgaagctgaggtggaggaggatgaggaagaggcagaagca
gaggaggaggaagacgtaaagcaggaggaacagacagcggacaagaagagtgatttagag
gacagtcctgcagaggagggagcaaatgatgaagactccccagatggagaggaggaagac
gcagacaaatccggcgagaagccagaggaggatattctcagaaggtcccccagaaacaga
aaagtgcgaaaggaatga
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