Clupea harengus (Atlantic herring): 105904104
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Entry
105904104 CDS
T09045
Symbol
snd1
Name
(RefSeq) LOW QUALITY PROTEIN: staphylococcal nuclease domain-containing protein 1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
char
Clupea harengus (Atlantic herring)
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GFIT
Motif
Pfam:
SNase
TUDOR
Agenet
Motif
Other DBs
NCBI-GeneID:
105904104
NCBI-ProteinID:
XP_031438173
Ensembl:
ENSCHAG00000019912
UniProt:
A0A6P8GGC6
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Position
16:904635..1070189
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AA seq
912 aa
AA seq
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MASSVSAHAQANPAPAPQLQRGIVKMVLSGCAIIVRGQPKGGPPPERQINLSNIRAGALA
RRAAQSQPDAKDFPDEPYAFQAREFLRKKLIGKEVCFTVEIKTAQGREYGLVYLGRDTSG
ESLAESLVVEGLATVRREGIRGNNPEQARLCDLEDQAKAARKGMWSEGGGAHTIRDLKYS
IENPRNFVDSLHQKPVNAIIEHVRDGSVVRALLLPDYYLVTIMLSGVKCPTFKRDPDGME
TIEPFAAEAKFFTESRLLQRDVQIILESCPNQVILGTIMHPNGNITELLLREGFARCVDW
SMAVYTQGADKLRAGERGAKERKVRIWKDYVAPTANMDQKDRQFVAKVMQILNADAIVGK
LNSGECKTIHLSSIRPPRLEGEEKIKDKDKRFRPLYDIPYMFEAREFMRKKLIGKKVNVT
VDYIRAATETGTIPAFPERTCATVTIGGINIAEALVSKGLATCIRYRQDDDQRSSHYDEL
LAAEARAIKNTKGLHSKKEFPIHRVADISGETQKAKQFLPFLQRAGRSEAVVEYVFSGSR
LKLYMPKETCLITFLLAGIECPRGGRNIPSGIQVAEPYSEEAMLFTKELVLQREVEVEVE
SMDKAGNFIGWLHIDGLNLSVALVETALSKVHFTAERSSYYKTLVSAEEPARERREKIWA
NYEEKPTEEVAALQSEERERVAKYRAVYVTEITDELHFYTQDVETGAQLENLMETMRAEI
AAAPPVDGSYAXRRGDFCISKFADGEWYRARVERVESPAKVHVFYIDYGNRETVSSTRLA
PLPPAFSTRTLAAQATEHAFAFIQVPLDEDARADVVDCIVRDIQNTQCQLNVEYSGATCP
HVTLQFTDSKDDVGLGLVKEGYVMVDVRKDKYLQKMVTEYLNGQESAKRDRLNIWRYGDF
RADDADEFGFRR
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatcggtctcggcacacgcacaggccaacccggctcctgctccgcaactccag
agaggaatagtgaagatggtgttgtctggctgtgccatcattgttcggggccaacctaaa
ggtggccctccgcctgagcgccagattaacctgagtaacatcagggcaggagcgctggcc
cggcgagctgcccagagccagccagacgctaaggactttccagatgagccatatgctttc
caggcacgagagtttctgaggaaaaagctgattggaaaggaggtgtgctttactgtggag
ataaagactgcccagggcagagagtatggcttggtctacctgggaagggacacgtcagga
gaaagcctggcagagtctctggtggttgagggtcttgccacagttcgtagagaaggcatc
agaggcaacaatcctgaacaggccagactgtgtgatctggaggaccaggccaaggctgct
cgaaaggggatgtggtcagaggggggtggtgcccacaccatccgtgacctgaaatacagc
attgagaatccccgcaactttgtggactctttgcatcagaaaccagtcaatgccatcatt
gaacatgtgcgagatggcagcgtggtgcgagctcttctcctgcctgattattacctggtg
acaatcatgctgtctggtgtcaagtgtccaacatttaagcgagatccagatggcatggag
accattgagccgtttgctgcggaggccaagttcttcaccgagtcccgcctccttcagagg
gacgtccagatcatcctggagtcctgccccaatcaggtcatcctgggcaccatcatgcac
ccgaatgggaacatcacggagctcctgctgagggagggctttgcacgctgtgtggactgg
tctatggctgtctatactcagggtgcagacaaactgcgagccggtgaacggggtgctaag
gaacgcaaagtgagaatctggaaggactacgtcgctcccactgcaaacatggatcagaaa
gaccgacagtttgttgccaaggtgatgcagatactcaacgcggacgccattgttgggaag
ctgaactccggagagtgcaagaccatccacctgtccagcatccgaccccccagactggag
ggagaggaaaagatcaaggacaaggacaagcgtttccgcccactctacgacattccatac
atgtttgaggccagagaattcatgaggaagaaactcataggaaagaaggtcaatgttaca
gtggattacatcagagctgccacggagaccggcaccattccagccttcccagagcgcacc
tgtgccacggtaacaataggaggcattaacattgcagaggccctcgtcagcaaaggtctc
gccacttgtatccggtatcgccaggacgatgaccagcgctcctctcactacgatgaactc
ctcgctgctgaagcaagagccatcaagaatactaaagggctgcacagcaagaaggagttc
cccattcacagagtggctgacatttctggggagacgcagaaggccaagcagttccttcca
ttcctgcagcgcgctggtcgctctgaggctgtggtggagtatgtcttcagtgggtcacgc
ctcaagctctacatgcccaaagagacctgtctcatcaccttcctactagctggtattgag
tgtcctcgtgggggccggaacattccaagtggcattcaggtggctgagccatacagtgaa
gaggccatgctgttcaccaaagaactcgtcctccagagagaggtggaagtagaagttgaa
agcatggacaaggcaggcaacttcatcggctggctgcacatcgatgggctgaacctgtcc
gtggccctggtggagactgccctctccaaggtccacttcactgctgagcggagctcctac
tacaagaccctggtctccgctgaggagcctgcccgtgagaggagagagaagatctgggcc
aactacgaggagaaaccaacagaggaagtggcagctctgcagtcagaagagagagagcgg
gtggccaagtaccgagccgtatacgtcactgaaatcacagacgaattgcacttctataca
caggatgtggaaacgggtgcccagttagaaaacctgatggagacgatgcgagcagagatc
gctgccgcgcccccagtcgatgggtcctatgctnctcgcagaggcgacttctgcatctcc
aaattcgctgatggcgagtggtaccgagccagagtggagagagtggagtccccagccaag
gtccacgtcttttacatcgactatggcaacagagagacggtctcctccacacgcctggct
cctctccctccagcgttcagcactcgcaccctggctgctcaggccacggagcatgccttt
gccttcatccaggtgcctctggacgaggatgcgcgggctgacgtggtggactgtatcgtg
cgcgacatccagaacactcagtgtcagctcaacgtggagtacagcggagccacgtgcccc
cacgtcacgctgcagttcaccgactccaaagacgacgtgggcctgggcctggtcaaggag
ggctacgtgatggtggacgtccggaaagacaagtatctgcagaagatggtgactgaatac
ctgaatggccaggagtcagccaagagagacaggctcaacatctggcgctacggagacttc
cgtgccgacgacgcggacgagtttggcttcagacgctga
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