Clupea harengus (Atlantic herring): 105904129
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Entry
105904129 CDS
T09045
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105904129 (rnf20)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105904129 (rnf20)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
105904129 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
CC_Bre1
zf-RING_UBOX
zf-RING_5
zf-RING_2
GP57
zf-rbx1
SOGA
Motif
Other DBs
NCBI-GeneID:
105904129
NCBI-ProteinID:
XP_012687434
Ensembl:
ENSCHAG00000010471
UniProt:
A0A6P3W1V5
LinkDB
All DBs
Position
20:complement(6871252..6882808)
Genome browser
AA seq
1011 aa
AA seq
DB search
MSGQKRPCDPSGSVSSGAPPEKRREREVGEETAGVSTTAGGSTAVETVIKLGGVSNPEEQ
DIKALQVKNRKLGEALDQRQVIEDELRDRVERLETRQATDDASLLILNRYWNQFDENVRH
IGRRYDQSGGEPVDGHISEGRSLKPDTPEPDGDSNPERAKDRGQQGETSNSFLATLASSS
SEEMEAELQERVESSCKQANRVADIYTSLKDTVDQLKKTVDSGIDSSLWDVATQLNSLLT
SENERLRQLTDSLKQKHSQMTSESRVLGRAATRADNRISELQVLVEELQWDMEKIRRREN
RLNTHLGEVLERVNSKGYKVCGEASSVCGTITINKRKFEEMNSELEENKELAENRLIELQ
KLQQDLQNVHQDNQSMRMELVCRAEGVVRDSAEYRCLQSQFSVLYNESLILKTQLDENRA
RLNTTRTARLRQLDHMENDEVSLQRKVRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANE
QAGPINREMRHLISTLQNHNQQMKAEVLKYKLRLRESQQELNVVRAAKGNAILQSQSSTE
LDVKEETASPLTPATGDVTVKVESDNDSATPTSTGASVKTEPGTEAELVVKEEDKDKDRD
KEREKEKEKEREREKDRATRGSATVKEERDRAGTSSSHLEENVAERCAVVGGPKRKEVEQ
LKILRAELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKAKSEGEELRQRLRELE
ERERREGKKMADEEALRKIRSVEEQIDILNKKLSLAKQEEDALLSEMDVTGQAFEDMQEQ
NIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTLKTQVVDAQLQVVRK
LEEKERLLQGTIGTAERELSLRTQALDMNKRKAQESALLSEEMKGQLESVQQRLSGVREE
VIENSTTREKESFNARRAQEDICKLRRKLEKAKKPADIPSGDEIMNEEINDYKARLTCPC
CNSRMKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIS
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcagaagagaccatgcgaccccagtgggtccgtctcctctggcgctcctcca
gagaagaggcgagagcgggaggtcggagaggagactgccggggtcagcacgacagcggga
ggaagcaccgccgtggagacggtgatcaaacttggaggcgtgtccaacccggaggaacag
gatatcaaagccctgcaggtgaaaaatagaaaactgggggaggctcttgaccagagacag
gtgattgaggatgagctgagggacagagtggagagactcgagactcggcaggccactgat
gatgccagcctgctgatcctcaacagatactggaaccagtttgatgagaatgtgcgtcat
atcggtcgacgctacgaccaatctggtggtgagccagtggatggccacatcagtgaaggg
cggagcctgaaacctgacactccggaacctgacggagactccaatccggagcgggcaaag
gaccgaggccagcagggggagacttccaactctttcttggccactctggccagtagtagc
agtgaggagatggaggcggaactccaggagagggtggagtccagctgtaaacaggccaat
cgcgtggccgatatttacaccagtctgaaggacaccgtggatcagctgaagaagactgtg
gacagtggaatcgacagtagcctgtgggatgtcgccacccagctcaactccctgttgacc
agtgagaatgaacgcttgcgtcagctgaccgacagcctcaaacagaaacacagccagatg
accagtgagtcgcgtgtgctgggtcgtgctgcgacacgggctgataatcgcatcagcgag
ctgcaggttctggtcgaggagctacagtgggacatggagaagatccgtcgccgagagaac
cgactcaacacacacctcggagaggtgctggaacgggtgaacagcaaaggttacaaagtg
tgtggagaagccagcagtgtgtgtggaaccatcaccatcaacaagagaaagtttgaggag
atgaatagtgagctggaggagaacaaggagttagcggagaaccgcctcatagaactgcag
aaactacaacaggatttgcagaacgtccatcaagacaaccagagcatgagaatggagttg
gtgtgccgggccgagggggtggtaagagatagcgctgagtaccgctgcctgcagtcccag
ttctcggttctgtataacgagtccctgattctgaaaacccagctggacgagaacagggca
cggctcaacaccactagaaccgcccgactacgccagctcgaccatatggagaatgatgag
gtatcactgcagcgtaaggtgcgtactgaagtcattcagctggaagacaccctggctcag
gtgcgtaaggagtacgagatgctgcgcatcgagtttgagcaaacactcgccgccaatgag
caagcaggtcccatcaacagagaaatgcgtcacctgatcagcacgctgcagaaccacaac
cagcagatgaaggcagaggtgctcaagtacaaactccgcctgagggagtcgcagcaggag
ctcaacgtggtccgtgcagcgaagggcaacgcaatcctccaatcccagtccagcactgag
cttgacgtaaaagaagagaccgcctctcctctgacaccagccacaggtgatgtcacagtg
aaggtggagtctgataatgactcggccacgcccaccagcacaggtgcctcagtgaagacg
gagcctggcacggaggcagaactagtcgttaaggaggaggacaaggataaggacagagac
aaagaaagagagaaggagaaagagaaggaacgagagagagagaaagacagagcgacccgt
ggtagtgcgactgttaaagaggagagggacagggctggaaccagcagcagccatttagaa
gagaatgtggcggaacgctgcgccgtggttggaggacctaagaggaaggaggtggagcaa
ctgaaaatacttcgtgctgagctcaagaaagcgcaggagtcacagagggagatgaagctc
ttgttggacatgtatcgctccgcccccaaagaacagagggataaagtccaactcatggct
gctgagaagaaagccaagtcagagggggaggagctgcgccaacgcctgcgagagctggag
gagagggaaaggagggaggggaagaagatggccgacgaagaggctctcagaaagatccgc
tccgtggaggaacagatcgacatcctcaacaagaagctgtccctggccaaacaggaggaa
gacgctctgctcagcgagatggatgtgacggggcaggccttcgaggacatgcaggagcag
aacatccggttgatgcagcagctgcgggagaaggacgacgccaacttcaagctcatgagc
gagaggatcaagtccaaccagatccacaagctgctgaaggaggagaaggaggagctcgcc
gaccagctgctcacactcaagacacaggtggttgatgcacagcttcaagtagtgaggaag
ctggaagagaaagagcggctcctacaggggaccatcggtactgcagagagggagctgtcc
ctccgaacacaggctttggacatgaataaacgcaaggcccaggagtctgcgttgctctct
gaggagatgaagggccagctggagtcggtgcagcagaggctgagtggggtgagggaggag
gtgattgagaacagcaccacccgcgagaaagagtccttcaacgcacggcgcgcacaggag
gacatctgcaagctgaggagaaaactggagaaagccaagaaaccagcggacatccccagt
ggtgatgagataatgaacgaggagatcaacgattacaaggcgcgtctgacctgcccgtgc
tgtaactcgcgaatgaaggacgccgtgctgaccaagtgcttccacgtcttctgcttcgag
tgcgtgaagacgcgctacgacacgcgccagaggaagtgccccaagtgcaacgccgccttc
ggggccaatgacttccaccgcatatacatcagctag
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integrated database retrieval system
