Clupea harengus (Atlantic herring): 105904217
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Entry
105904217 CDS
T09045
Name
(RefSeq) B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04371
Apelin signaling pathway
char04514
Cell adhesion molecules
char04520
Adherens junction
char05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
105904217
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105904217
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
105904217
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
105904217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105904217
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105904217
04090 CD molecules [BR:
char04090
]
105904217
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
105904217
Cell adhesion molecules [BR:
char04515
]
Cadherins
Major cadherins
105904217
CD molecules [BR:
char04090
]
Proteins
105904217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
TMEM154
Motif
Other DBs
NCBI-GeneID:
105904217
NCBI-ProteinID:
XP_031418078
UniProt:
A0A6P8EPI4
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Position
3:complement(13392828..13419716)
Genome browser
AA seq
882 aa
AA seq
DB search
MKDTCRLRFPEGHTPDQTRGTGNKPISTAHQTTPDQTRGTGNKPISTAHQTTPDQTRGTG
NKPISTAHQTTPDQTRGTGNKPISTAKRLSGINQDIPSFPVLEFPAFRRGMIRRRREWVI
PPISISENDRGSYPKSVVQIRSSLAREVPIRYRLVGPGADQPPQGLFTIHQTSGMLFVTK
ALDRENTQEYKVQYHHTLTAHAIVVGTEGDRPAEGPMDIIIRVLDQNDNHPVCTRDLFWG
NVSEVAPIGQPVLQVTAEDSDDPKTENGVVRYRLLRQVPPQPNAEMFSIDGVSGLISVAS
VGLDSETHHGYRLVIEAADMEGRGLTTSCTATISITDSNDHAPKFSHTTYRGSIGENVAG
GVVVTLPVTDLDKPLSPASATTYTIVRGNERGLFSISTGPGKMEGIITTAKGLDFEQKRQ
HTLLVAVENEVPFAVPLKTSTATVIVEVEDLNEEPKFEPEQKLVTAAEDLPVGTVIAEYK
AKDPDVAREQTVRYKLLSDPAGWLEVSRDSGLVRLRNALDREHTLVIDRTYTALVIAYDN
DLSPASGTGTLVIEVGDVNDNAPLVKETHLQFCSLDPVPVPLTILDADGPGNADPFTVQL
AETSWVNWTIITNSTTGAVSVKPRGQLPSAEYPVVVHVYDAHMLAQESALLAEVCQCSGA
VTICLHPLPRTNPSAATLSMAVLGVVLFLLVLLLLLIVLIKRRRREKQEVLLPEEEVRDT
LFFYNEEGGGEDDQEYDLSQLHHGLASGPEVVCTAVAPPLVPPMPYRLRPDENEEIGSFI
NDNLQAADNDPTAPPFDCLMVFDYEGAESACGSLSTLQSSSSDRDQDSQHLQEWGSDRDQ
DYQHLQEWGPHFRRLADMYGGGEDDDDDGDDDDILPGRKEWV
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacacctgtcgtctgagattccctgagggacacacaccagaccagaccagaggc
acagggaacaagcccatctccacagcacaccagaccacaccagaccagaccagaggcaca
gggaacaagcccatctccacagcacaccagaccacaccagaccagaccagaggcacaggg
aacaagcccatctccacagcacaccagaccacaccagaccagaccagaggcacagggaac
aagcccatctccacagcaaagagactgagtgggataaaccaggacattcccagttttcca
gtcttggaattcccagcattccgaagagggatgattaggaggcggagagaatgggtgatt
ccaccaatcagcatctccgagaatgacagaggctcttaccccaaatctgtggtgcagatc
agatccagcttggcccgagaggtgcccatcaggtaccggctggtgggaccaggagcagac
cagcctccccagggcctgttcaccatccaccagacctccggcatgctgttcgtcaccaag
gccctggacagggagaacacacaggagtacaaggtgcagtaccaccacacactcacagct
catgccatagtggtgggcactgaaggagatcgtccagccgaaggccccatggacatcatc
atcagagtgctggaccagaatgacaaccacccagtctgcacccgtgatctcttctggggg
aacgtgagcgaggtggcccccattggtcagccggtgctgcaggtcacagcagaggactcg
gacgaccccaagacggagaacggcgtagtgaggtaccggctccttagacaggttcccccg
cagcccaacgcagagatgttctccatcgatggagtcagcggcctcatcagcgtggcctcc
gtagggctggatagtgagactcaccatggctacaggctggttattgaggcagctgatatg
gagggccgcggtctgaccacgtcctgcaccgccaccatctccatcaccgacagcaacgac
cacgctcccaagttcagtcataccacttacaggggctcaataggggagaatgttgcgggt
ggcgttgtggtgactcttcctgtgacggacctggacaagccactgagccctgcatctgcc
accacatacaccatcgtcaggggcaacgagaggggcctcttcagcatcagcaccggtcct
ggcaagatggagggcatcatcaccactgccaagggtctggactttgaacagaaacgtcaa
cacacacttcttgttgccgtggagaatgaggttccttttgccgtgcccctgaagacctcc
acagcgactgtcattgtggaggtggaggacctgaatgaggagcccaagtttgagcctgaa
cagaaactggtcacagctgcagaggacctgcctgtgggtactgtgatagcggagtacaaa
gctaaagaccctgacgtcgccagagaacaaacagtgaggtataagctgttgtctgacccg
gctggttggttggaggtgagcagagactctggcttggtgcgcctgaggaacgcactggac
agggaacacaccctggtgattgacaggacgtacaccgccctcgtcatcgcctatgacaac
gatctgagccctgcctctggcacggggacgctggtgatcgaggtgggggacgtgaacgat
aacgcccccctggtgaaggagacacacctccagttctgctccctcgatccggttcctgtt
ccgctcaccatcttagatgcagacggaccgggcaacgctgacccattcaccgtccagctg
gcagagaccagctgggtcaactggaccatcatcaccaactccaccactggtgcagtgagt
gtgaaaccccgtgggcagctgccctctgctgagtaccccgtggtggtgcacgtgtacgat
gcccacatgctggctcaggagagcgccctgctggccgaggtgtgccagtgcagcggcgcc
gtcaccatctgcctccaccccctgccacgcaccaaccccagcgcagccaccctctccatg
gcagtcctgggggtcgtgctcttcctgctggtgctcctgctgctgctgatcgtcctcatc
aagaggaggaggagggagaaacaggaagtgctgctgccagaagaggaagtgcgagacaca
ctcttcttttacaacgaggaaggaggaggggaagacgatcaggagtatgacctgagccag
ttgcatcatggactagcctccggtcctgaggtggtgtgcactgctgtagctccgcccctc
gtcccgcctatgccctacagactccgcccagatgagaacgaggagatcggaagcttcatt
aatgataacctgcaggctgccgacaacgacccaacagcgcccccctttgactgtctgatg
gtgtttgactacgagggggcagagtcggcctgcggctctctcagcaccctgcagtctagc
agctcggaccgagaccaggactcccagcacctgcaggagtggggctcggaccgggaccag
gactaccagcacctgcaggagtggggcccgcacttcaggaggctcgcggacatgtacgga
gggggagaggacgacgacgacgacggcgacgacgacgacatcctgcccgggaggaaggag
tgggtctga
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