KEGG   Clupea harengus (Atlantic herring): 105904265
Entry
105904265         CDS       T09045                                 
Symbol
plod1a
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 isoform X2
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char00310  Lysine degradation
char01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:char00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    105904265 (plod1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:char04147]
    105904265 (plod1a)
Enzymes [BR:char01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     105904265 (plod1a)
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   105904265 (plod1a)
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3
Other DBs
NCBI-GeneID: 105904265
NCBI-ProteinID: XP_031422927
Ensembl: ENSCHAG00000003555
UniProt: A0A6P8FI92
LinkDB
Position
4:32210322..32229547
AA seq 733 aa
MKSVIFIVLYTIALLVLFASVRCEKKDSISEGNLIVLTVATEETDGFRRFMRSAQHFNYT
VKVLGKGEKWNGGGYMSPPGGGQKVRLLKAALEEVTEKDKVILFTDSYDVVFASGPRELL
KKFQQARHKVVFSSETLIWPDRHLEDKHPYPKEGNRFLGSGGFMGYASNLKELVSSWTGK
DNESDQLFYTRVYIDPEQRKALNITLDNKCRLFQNLNGALDEVVLKFEDGQVRARNVLYD
TLPVMIHGNGPTKLQINYLGNYIPKLWTFETGCTVCSEDLRPLSGLKETEYPLMVIGIFI
QQPTPFVSVFFERLLKLKYPKNRLKLFIFNQEPHHENQVVSFVKDHGMEYQAVKLIGPEE
GVDAIESRNLGFAECREDSDCEYFFSVDIEVVLKNEDTLKILVELNKPLIAPMMIKPGKL
WTNFWGALSADGYYARSEDYVDIVQGRRVGIWNVPYMSHVFLVKASVLRHQLSAADLFRS
DTLDADMAFCRHARDQGVFMHVTNLHSFGRVLSTENYQMNHLHNDLWQIFENTVDWEERY
IHENYTRIMKDKLLETPCPDVYWFPIFSEVACDHIVEEMENFGQWSGGGNKDQRIQGGYE
NVPTIDIHMNQINYEKEWHKFLVDYIAPITEKMYPGYYTKCTSYLNFVVRYKPDEQPLLA
PHHDASTFTINVALNSKDIDYQGGGCRFLRYNCSIQAPRKGWTIMHPGRLTHYHEGLPTT
GGVRYIAVSFIDP
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgaaatcggttatattcattgttttatatacgatcgcattgttagtactgttcgcgtca
gtacgttgtgagaaaaaggattcaatttccgaaggcaatctgatagttttgacagttgct
accgaagaaacagatggctttcggcgtttcatgagatcggctcaacatttcaattacacg
gttaaggtgctgggcaaaggggagaaatggaatggtggaggctacatgagccccccagga
ggaggtcagaaggtgcgtctcctcaaagctgccctggaggaggtgacggagaaggacaag
gtcatcctgtttactgacagctacgacgtggtgtttgcctctgggccgagggagctgttg
aagaagttccagcaggccagacacaaggtggtcttctcctcagagaccctgatctggccc
gaccgacacctggaggacaagcacccctaccccaaagagggcaacaggttcctgggctca
ggagggttcatgggctatgcttcaaacctcaaagaactggtgtccagctggacagggaag
gacaatgagagcgaccagctcttttataccagggtttatattgacccagagcaaaggaaa
gccctaaatataactctggacaacaaatgcagactgtttcaaaatctcaacggagctctg
gatgaagtcgtgctaaagttcgaggatgggcaagtcagggccagaaatgtgctatatgac
accttgcccgtcatgatccacggcaacggacccaccaagctccagattaactacctgggc
aactacatccctaagctgtggacgtttgagactggctgcaccgtgtgcagtgaggacctg
cgccctctctctggcctgaaggagacagaatacccactgatggtcatcggcatcttcatc
cagcagcccaccccctttgtctccgtcttcttcgagcgtctgctgaagctcaagtaccct
aaaaacagactcaagctcttcatcttcaaccaggagcctcatcacgagaaccaggtggtc
agctttgtgaaggatcatgggatggaataccaggcggtgaagctgattggtcccgaggag
ggcgtggatgccattgagtctcgtaacctgggctttgcggagtgcagagaggacagtgac
tgtgagtatttcttcagtgtggacatagaggtggtcctgaagaacgaggacactttgaag
atcctcgttgagctcaacaagcccctgatcgcccccatgatgatcaagcctgggaaactc
tggaccaacttctggggagccctcagtgcggacggatactacgcccggtccgaggactac
gtggacatcgtgcagggacgcagagttgggatctggaacgttccgtacatgtcccacgtg
ttcttggtgaaggccagtgttctgaggcaccagctgagtgcagcggacctcttccgctcc
gacaccctggacgccgacatggccttctgtcgccacgcacgagaccagggagttttcatg
catgttacaaacctgcactccttcggacgagttctgtcgacggaaaactaccagatgaat
cacttgcacaacgacctctggcagatcttcgagaacactgtggactgggaggagcgatac
atccatgagaactacactcgcataatgaaggacaagttattagaaacgccctgccccgat
gtgtactggttccccatcttctccgaagtggcgtgtgatcacatcgtggaagaaatggag
aactttgggcagtggtccggaggaggcaacaaggaccagcgtatccaagggggctatgag
aacgtgcccaccatagacatccacatgaaccagatcaactatgagaaagagtggcacaag
ttcctcgtggactacatcgcgcccatcacagagaagatgtacccgggctactacacaaag
tgcacgtcatacctcaactttgtagtgcgatacaagccagacgagcagcctctgctggca
ccccatcacgacgcctctacttttactattaacgtagctctcaacagcaaagacattgac
tatcagggtggaggttgccggttcctgcggtataactgctccatccaggctccgcgtaaa
ggctggaccatcatgcacccgggccgcctcactcattaccacgagggcctgcccaccacg
ggaggcgtccgctacatcgcagtgtctttcattgacccttga

DBGET integrated database retrieval system