Clupea harengus (Atlantic herring): 105904281
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Entry
105904281 CDS
T09045
Symbol
top1b
Name
(RefSeq) DNA topoisomerase 1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
char03032
]
105904281 (top1b)
Enzymes [BR:
char01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
105904281 (top1b)
DNA replication proteins [BR:
char03032
]
Eukaryotic type
DNA Topoisomerases
105904281 (top1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
105904281
NCBI-ProteinID:
XP_031421779
Ensembl:
ENSCHAG00000023109
UniProt:
A0A6P8F952
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Position
4:complement(6641363..6660895)
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AA seq
771 aa
AA seq
DB search
MSGDHGYKDYQMDSGARINDSHKHKDKHRDKEHKHKDHKKDREREKSKHSNSDHRDPSEK
KHRDRDREREREKEKVKPKDDSLEKHKDKEKRREEKMKSHSADGKHKREKENGFASPPRI
KLETEDNGFHHSPKHEKSVKRQYDDGEAEFKPKKVKVEVEKKAKKRKHEDYYEDEEEEED
VKPKKKTKDKKQETAGGKKKVKKEPEEKWKWWEEERATDGSKWRFLEHKGPVFAPPYEPL
PGHVRFYYDGKPFKLATAAEEVATFFAKMLDHEYTTKDVFRKNFFKDWKKEMTSEEKAKL
TDLNKCDFNEMNEYFKAQSEARKQMTKDEKLKIKLENERILEEYGFCVMDNHRERIGNFR
IEPPGLFRGRGNHPKMGMLKRRIRPQDVIINCSKDSKHPKPPHGSKWKDVRFDNKVTWLA
SWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKSCVERLRTQYREDWKSKEMRIRQ
RAVALYFIDKLALRAGNEKEDGETADTVGCCSLRVEHIKVYAELDGQEYVVEFDFLGKDS
IRYYNKIPVEKRVFKNLQLFLENKQPEDDLFDRLNTSILNKHLQELMDGLTAKVFRTYNA
SITLQQQLKELTCADDNDPAKILSYNRANRAVALLCNHQRAPPKTFEKTMQNLQTKIDEK
KKQLSSTKKEFKAAKADAKSLHDDKSRKAVETKKKAVQRIEEQLMKLEVQATDREENKQI
ALGTSKLNYLDPRISVAWCKKYNIPLEKVYNKTQREKFAWAIDMAEDDFEF
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgaccatggttataaagactatcagatggactctggtgctcgtatcaatgac
tctcacaaacacaaggacaaacacagagacaaggagcataaacacaaagaccacaagaaa
gacagggagagggagaaatccaagcacagcaacagtgatcacagagacccttcagagaag
aagcacagagatagagacagagagcgagagcgagaaaaagagaaggtgaagccgaaagat
gacagcctggagaagcacaaggacaaagagaagagacgggaggaaaagatgaagtcccat
agtgcagacggcaaacacaagagggagaaggagaatggatttgcgagccctccgcgcatt
aaacttgaaacagaggacaatggcttccaccactcccccaagcatgagaagtcagtgaag
aggcagtatgatgatggagaggcggaatttaaacctaaaaaagtcaaggtggaggttgag
aaaaaggcaaagaagaggaaacatgaggactattatgaagacgaggaagaggaagaggat
gttaaacccaaaaaaaagacgaaagacaagaaacaagagacagctggtgggaaaaagaag
gtgaagaaagagccggaggagaaatggaaatggtgggaggaggagagagccacagacgga
tccaaatggaggtttctagaacacaaaggccccgtgtttgctcctccctacgaacctctt
cccggacatgtcagattttattacgacgggaagcctttcaagctggccaccgccgcggag
gaggtggccacattctttgccaaaatgctcgatcatgagtacaccactaaagacgttttc
aggaagaactttttcaaagactggaaaaaggaaatgacgtcggaggagaaggcaaagctc
acagatctgaacaagtgtgacttcaatgagatgaatgagtactttaaggctcagtcagaa
gccaggaagcagatgacgaaagacgagaaactgaaaatcaaactagagaacgagaggatc
ctagaggagtacggcttctgcgtgatggataaccaccgcgagcgcatcggcaacttccgc
atcgagcccccgggactattccgtggccgcggcaaccatcccaaaatggggatgctgaag
cgccgcatccgtccacaggatgtcatcatcaactgcagcaaggactccaaacaccccaag
ccgcctcacggcagtaagtggaaggacgttcgttttgacaacaaggtgacgtggctggct
tcttggacggagaacatccagggctccatcaaatacatcatgctcaaccccagctccagg
atcaagggtgagaaggactggcagaagtacgagacggcgcggcggttgaagagctgtgtg
gagcgcctccggacccagtaccgcgaggactggaagtccaaagagatgaggatccgacag
cgggccgtggctctctatttcatcgacaagctggccctgagagcaggcaatgagaaggag
gatggcgagacggccgacacggtgggctgctgctcgctgcgtgtggagcacatcaaggtt
tacgccgagctggacggccaggagtacgtggtggagttcgacttcctggggaaggactcc
atccgctactacaacaagatccctgtggagaagagggtatttaaaaaccttcaacttttt
ctggagaacaagcagcctgaagatgacctcttcgacaggctcaatacctccatcctgaac
aagcacctgcaggagctgatggacgggctgacggccaaagtgttccgtacctacaacgcc
tccatcaccctccagcagcagctgaaggagctcacctgcgccgatgacaacgatccagct
aagatcctttcctacaaccgagccaacagagctgttgctttactgtgtaaccaccagagg
gcgccacctaagacctttgagaaaaccatgcaaaaccttcagaccaaaattgatgaaaag
aagaaacagctctcatctaccaagaaggagtttaaggcggccaaggcagatgcaaagtct
cttcatgatgacaaaagcagaaaagccgtggaaaccaagaagaaggctgtgcagaggata
gaggagcagctgatgaagctggaggtgcaggccacggaccgcgaggagaacaagcagatc
gccctcggcacctccaagctcaactacctggacccgcgcatctccgtagcctggtgtaag
aagtataacatccccttggagaaggtctacaacaaaacccaacgtgagaagtttgcttgg
gccatcgacatggcagaagacgactttgaattttaa
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