Clupea harengus (Atlantic herring): 105904301
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Entry
105904301 CDS
T09045
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03022
Basal transcription factors
char03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105904301 (gtf2h3)
09124 Replication and repair
03420 Nucleotide excision repair
105904301 (gtf2h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
105904301 (gtf2h3)
03400 DNA repair and recombination proteins [BR:
char03400
]
105904301 (gtf2h3)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105904301 (gtf2h3)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105904301 (gtf2h3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
105904301
NCBI-ProteinID:
XP_031440733
Ensembl:
ENSCHAG00000012938
UniProt:
A0A6P8GPQ5
LinkDB
All DBs
Position
18:4484896..4489150
Genome browser
AA seq
294 aa
AA seq
DB search
MASEEEVSLLVIVLDVNPIWWGQQAQREPEFTLSKCLDAVMVMANSHLIMTRTNKLAIIA
STCQESHFLFPSKNWDDATATSGDGKYELLSVANDLVAEEIKGLMARTEVKGNQTDTLLA
GGLAKALCYIHRISKQLDAGQDMKSRILVIKAAEDCALQYMNFMNVIFAAQKQSVLIDAC
VLDSESGLLQQACDITGGLYLKVPQKVALTQYLLWVFLPDSEQRSQLVLPPPVHVDYRAA
CFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIQLPHMVKAKKKKVRPVT
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagaagaagaagttagtcttctggtcatcgtattggacgttaatccaatatgg
tggggacagcaagcgcaacgggaaccagagttcaccctgtcaaaatgcctggatgctgtg
atggtcatggctaactcccacttgatcatgaccaggaccaacaaactggccatcattgca
agcacctgtcaggagagtcatttcctgtttcccagtaagaactgggatgacgcaacagca
accagtggcgatggcaaatacgagctcctatcagtcgcgaatgacctcgtcgctgaggag
ataaagggcctcatggcacgaacggaggtgaagggtaaccagacagacacgctgttggct
ggaggacttgccaaggccctgtgctacatacaccgtatctctaaacaactggatgctggc
caggacatgaagtcaagaatacttgtgatcaaagcagcggaagactgtgctctgcagtac
atgaatttcatgaatgtaatcttcgcggctcagaaacagagtgtccttatagatgcttgt
gtgctagactccgaatcaggtctcctacaacaggcttgtgacataactggggggttgtat
ctcaaagtaccacagaaggtcgccctcacacagtatttactgtgggtgttcctgcccgac
tctgaacagcgctcccagctggtcctgccccctccggtccacgtggactacagggctgcc
tgcttctgccaccgcaacctcatcgagatcggctacgtctgctccgtctgcctgtccata
ttctgcaacttcagcccgatctgcacaacatgcgaaactgcctttaagatccagctgccc
catatggtgaaggccaagaagaagaaggttaggcccgtgacgtga
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