Clupea harengus (Atlantic herring): 105904401
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Entry
105904401 CDS
T09045
Symbol
si:dkey-251i10.3
Name
(RefSeq) U3 small nucleolar RNA-associated protein 14 homolog A isoform X1
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105904401 (si:dkey-251i10.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
char03009
]
105904401 (si:dkey-251i10.3)
Ribosome biogenesis [BR:
char03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105904401 (si:dkey-251i10.3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp14
Motif
Other DBs
NCBI-GeneID:
105904401
NCBI-ProteinID:
XP_031427463
Ensembl:
ENSCHAG00000005275
UniProt:
A0A6P8FGB8
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Position
8:complement(5542917..5561178)
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AA seq
816 aa
AA seq
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MAKTKKKSVTFDLPRKVATVSAMDEEVESDEDFLPDNENIISASEDEDAGDDERKHTKLL
EAISGLGGRRRKKMTERSEASLQVSEFGVNAEGAGEKVALSDLLSSATEASRTDGTMTKT
HRQLKNLEKRQATLELPLSHQQTEKIQREAAFEKASKEVSRWESTIVHQQRAEQLFFPLN
QQPSRPRRMEQLVTSWKTQTPLEQEVFALLHAHRQPTFDPVLTPVEEAQLQAMSLEEAQL
RRAELQKARALQSYYEAKAKRGSKIKSKKYHKVQQKAKRKAFLKQFEDLCKSDPERAMEE
LQNMEKKRIEERMSLKHQNSGKWAKSRVIMAKYDLGARQAMHEQLELNRQLTHKPLPSSE
LHDDSDDDSNSDPTLASEDQTLPDIVNEASANQKEGANPWMKMAVVLTTAEQEEPKAVAD
SETPEAAVSDAGEVGEEREEETEEERLLGEFARRRQLRRTNDEEEEDKEARQTAEASQTD
GASEVSPSRADRSDDDDDGDEDEEDQMDEAAASELNALFGRLAKQAQQGAAPLGSSAELL
DEDTTRVRTLEQAELLAETHNDTAPPVAQVESEEAAPGHDVDDPAPKGKGHQKVIDPEQV
LTKQARSIRVPMTTPAIEDAEDEALDEQTDMIREAFAGDDVVSDFLKEKRKQEEEGRPKD
VDLSLPGWGEWGGVGIHTKKQKRKRSRFLKKAPPAAPRKDRKLPAVIISEKRDASVAAHQ
VSQLPFPFENPSQFERSIRSPLGSTWNPELAVRKLTAPRIVTKAGAIIEPISRDDIMPAK
AVAGKRRAAPDIQLGGDAERRGGHHRPGAKKKKHKK
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaccaagaagaaatcagtgacatttgacttaccaagaaaagtcgccactgtc
agcgcaatggacgaggaggtggaaagcgatgaagatttccttccagataacgagaacatc
atcagtgcgagtgaggatgaggatgccggcgacgatgagcgcaaacacaccaaactcctg
gaggccatcagcggactggggggccggaggaggaagaagatgacagagaggtctgaggcc
agcctgcaggtgtcagagtttggcgtcaatgcagagggtgcgggcgagaaggtggcgctc
tcagatctgctgagttctgcgacagaagcatccagaactgatggaaccatgacaaagact
cacagacagctgaagaacctggagaaacgtcaagccactctggaacttcccctgagccac
cagcagacagaaaaaatccagcgtgaggcggcgtttgagaaggcgtctaaggaggtctcg
cgttgggagagtaccatagtccaccagcagagggcagagcagcttttcttccccctcaac
cagcagccctccaggcccagacgcatggagcagctcgtcaccagctggaagactcagaca
ccgctggagcaggaggtgtttgctctgcttcacgcccaccggcagccgacttttgacccc
gtgttgacccccgtggaggaggcgcagctccaagccatgagtctggaggaggctcagttg
cgtcgtgctgagctacagaaggctcgagcactgcagtcctactacgaggccaaagccaag
agggggagcaagatcaagagcaagaagtaccataaggtgcagcagaaggccaagaggaaa
gccttcctgaagcagtttgaagacctgtgcaagagcgaccccgagagggccatggaggaa
ctgcagaatatggagaaaaaacggatagaggagcggatgtctctgaagcatcagaacagc
ggaaaatgggcgaagtccagagtcatcatggccaaatatgatctgggggcacgacaggcc
atgcacgaacagcttgaactcaaccgccagctcacccacaagcccctcccttcctctgaa
ctccatgacgacagtgacgatgactccaacagcgaccccactctggccagtgaagaccag
acactgcccgacatcgtcaacgaggcatcggccaatcagaaggaaggggcaaatccctgg
atgaagatggctgtagtcttgacaacggcagagcaggaagagccaaaggcggtggctgac
agtgaaactccggaggctgccgtgtcggacgctggtgaagtgggagaagagcgggaggag
gagacggaggaggagaggctgctgggagagtttgcccgccgacggcagctgaggaggact
aacgatgaagaggaggaggacaaggaagccaggcagacggctgaggcttcacagactgat
ggagcttccgaagtctccccatccagagctgaccgtagcgatgatgatgatgacggtgat
gaagacgaagaggaccagatggatgaagcggctgcatcagaactcaacgctctcttcggc
cgcctggccaagcaagcacaacagggtgcggcacccttgggttcctctgcggagctgctg
gacgaggatacgacacgagtccgcacgctggagcaggccgagctgctggcagagactcac
aatgacaccgccccccccgtggcccaggtggagtcggaggaggctgcaccaggacatgat
gtggatgaccccgcccctaaggggaaaggtcaccagaaggtcatcgacccagaacaggtg
ctgaccaagcaagccaggagcatccgtgttcccatgacaacgccggccatagaggatgct
gaggatgaggccctggacgaacagacagacatgatccgcgaggcttttgcaggagatgat
gtcgtctctgacttcctgaaggagaagcggaagcaggaagaggaggggcgacccaaagat
gtcgacctatcactgcccggctggggtgagtggggaggggtcggcatccacaccaagaaa
cagaaacgcaaacgcagtcgcttcctgaagaaagctccgcctgctgcccccaggaaagac
cggaagcttccggccgtcatcatctcagagaagcgtgatgcctctgtcgccgcccaccag
gtgagtcagcttccattcccctttgagaaccctagccagtttgaaaggagcatccgttcc
cctctcggttctacgtggaacccggagttggccgtgaggaaactgacggcccctcggatc
gtgacaaaggcgggggccatcatcgagcccatctccagggacgacatcatgccggctaag
gcagtggcaggcaagcgccgcgccgcccccgacatccagctgggcggcgacgctgagcgc
aggggggggcaccacagaccaggagccaagaagaagaagcacaagaaatga
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