Clupea harengus (Atlantic herring): 105904546
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Entry
105904546 CDS
T09045
Symbol
sec24d
Name
(RefSeq) protein transport protein Sec24D
KO
K14007
protein transport protein SEC24
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105904546 (sec24d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105904546 (sec24d)
Membrane trafficking [BR:
char04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
105904546 (sec24d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
105904546
NCBI-ProteinID:
XP_031440688
Ensembl:
ENSCHAG00000004959
UniProt:
A0A6P8GPL2
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All DBs
Position
18:complement(13158153..13186386)
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AA seq
1037 aa
AA seq
DB search
MSQQGYVAAPPYSQAQPGMGGYPSGYGGPPPQPMYGHYGAPPTGVAKGPVATPPPVSQYG
SPMQQNGAHPQRIQPPSAVSSPYGQPPQVPYQSMAPQSLPPAQQLSNQMSGMQISGYGQM
PMQPTQGPPSSAPQHPLQPGPPQMMSQPGPPHMMSQPGPPQMMSQPGPMVPGPQTQPLGS
PPPMGAAPPMTGMAAPPMGMSGPFSGPPPMGGAGFQQSPGQMQPQGFPQQPGPYGGPMAA
PQPGFPGAFPGGASQMAGPPQKKLDPNSIPSTTQVIEDDQAKKGGQLYTTNVRGQVPPLV
TTDFTVQDQGNASPRFMRCTSYTFPCTSDLAKQCQVPLATIIKPLATIPKTESPLFMVNH
GETGPIRCNRCKAYMCPYMQFMDGGRRYQCAFCNCVNEVPAFYFQHLDHMGRRMDVYERP
ELSLGSYEFIATLDYCKNNKPPSPPAYIFMIDVSFSNIKSGLVRLVCEELKTLLDRLPRE
DGAESSVVKVGFVTYNKVLHFYNVKSALAQPQMMVVSDVAEMFVPLLDGFLVNFTESRAV
INNLLDQIPDMFADTNESETVFAPVVQAGVEALKAADCSGKLFIFHSSIPTAEAPGKLKN
RDDRKLVSTDKEKTLFQPMRGVYEQLVKDCVSQGCCVDLFLFPSQYLDLATMGDTPTHTG
GSVYKYSNFQVEMDGENFLSDLRKDVEKPIGFDAIMRVRTSTGFRATDFHGAVHMNNTTD
VEMAAIDCDKAVTVEFKHDDTLSEETGALMQCALLYTTVGGQRRLRVHNLSLNCSAQLSE
LYKSCETDALINFFAKSAYRAMLNQPLKTVRDILVNQTAHMLACYRKNCASPSAASQLIL
PDAMKVFPVYMNSLMKTLPLVSSSELATDERAYQRLTVLSMGVEDTQLLLYPRLIPLHTM
SVDSDAVPAAVRCSEERLTDGGVFLLENGRSLFLWVGQSCPPDLVQSLFNVPSLAHLPPD
QSSLPDLDNPYSKKLRSIISSICEQRSNSMKVLVVRQKDRPEVLFRQQLVEDKGLHGGAS
YMDFLCYVHREIRQLLT
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcagggatatgttgctgcccctccctactcccaggcacagcccggaatgggg
gggtacccaagtgggtatgggggacccccccctcagcccatgtacggacactatggagcc
cctcccacaggtgttgccaaagggccggtggccactccccctccagtgtctcagtacggg
tcaccaatgcagcagaacggagctcacccacagaggatccagcccccgtcagcagtctcc
tccccctacggacagccaccccaggtcccctaccagagtatggcccctcagtccctgccc
cctgcccagcagctgtccaatcagatgagtggaatgcagattagtggctatggccagatg
ccaatgcaacccacccagggccctcccagctctgccccacagcatcctctgcagcctgga
cccccccagatgatgtcccagcctggacccccccatatgatgtcccagcctggacccccc
cagatgatgtcccagccggggccaatggttcccgggccccagactcaacccttgggttcg
cctccaccaatgggtgctgctcctcctatgactggcatggcagctccaccaatggggatg
tctggacccttctctggcccgcctcctatgggaggggctggattccagcagtcccctggt
cagatgcaaccccaggggtttccacagcaaccaggtccgtacggggggccaatggctgct
ccacagccaggattcccaggtgcgttcccggggggagcctcacaaatggctggacccccc
cagaagaagctggaccccaactccattcccagcacaactcaggttatagaggatgaccag
gccaagaaaggggggcagctctacaccaccaatgtcagaggacaggttccccccctcgtc
accaccgacttcactgtgcaggaccaaggtaatgcgagccctcgcttcatgcgctgcacg
tcctacaccttcccctgcacctctgacctagccaaacagtgccaggttcccttggcaacc
atcatcaaaccccttgccaccatccccaagactgagtctcctctgttcatggtgaatcat
ggtgagactgggcccatccgctgtaaccgctgcaaggcctacatgtgtccctacatgcag
ttcatggacggaggacgccgctaccagtgtgcgttctgcaactgtgtcaacgaagtgcca
gcattttacttccagcatctggaccacatgggtcggcgtatggatgtatacgagcgtccg
gaactttctctgggctcctacgagttcatcgccacgctagactactgcaagaacaacaag
ccccccagcccccctgcctacatcttcatgattgacgtgtccttctccaacatcaagagc
ggcctggtcagactagtgtgtgaagaactcaagactctactggacagactgcctagggag
gacggtgcggagagctctgtggtgaaggtgggctttgtgacctacaataaggtgctgcac
ttctacaacgtgaagagcgctctggcccagccccagatgatggtggtgtccgacgtggcc
gagatgtttgtgcctctgctggacggcttcctcgtcaacttcaccgagtcccgcgccgtc
atcaacaatctgctggatcagatccctgacatgtttgctgacactaatgagagtgagacg
gtgttcgctccagtcgtccaggcaggagtagaggcactcaaggctgcggactgctctggg
aagctcttcatcttccactcctccatccccaccgctgaggctcctgggaaacttaagaac
agggatgacaggaagctggtcagcacagacaaggagaagacgctgttccagccgatgcgt
ggtgtgtatgagcagctggtgaaggattgtgtgtcccagggctgctgtgtggacctcttc
ctcttccccagccagtacctggacctggccaccatgggggacacccccacacacacgggc
ggatcagtgtacaagtacagcaacttccaggtggagatggatggagaaaacttcctgagt
gacctgcggaaggacgtggagaaacccatcggctttgatgccatcatgcgtgtccgcaca
agcacagggttcagggccacagatttccacggtgccgtccacatgaacaacaccacagac
gtagagatggccgccatcgactgtgacaaggccgttaccgtggagtttaaacatgatgac
actctcagtgaggagactggagcactcatgcagtgtgcactgctctacaccacggtgggc
ggccagcggcgtctgcgggtccacaacctgagtctgaactgcagcgcccagctgtccgag
ctctacaagagctgtgagaccgacgccctcatcaacttcttcgccaaatcagcgtaccgc
gccatgctcaaccagcccctgaagacggtcagggatatcctggtcaaccagaccgctcac
atgctggcctgctacaggaagaactgcgctagtccttctgctgctagtcagctgattctg
cctgatgccatgaaggtgttccccgtctacatgaacagcctgatgaagactttgcccctc
gtgagcagtagtgaactggccactgatgagagagcctaccagagactcacagtactcagc
atgggagtggaggacacacagctgctgttatacccacgactcatacccttgcacaccatg
tctgttgacagtgatgctgtcccggcagcagttcgctgctctgaggagcgcctgacggat
gggggcgtgttcctgctggagaatgggcggagtctgttcctgtgggtggggcagtcctgc
ccacctgacctggtgcagagcctcttcaacgtgccttcactcgctcacctaccacctgac
cagagctctcttcctgacctggacaacccctactcaaagaagctgcggtccatcatctca
tccatctgtgagcagagatccaattccatgaaggttctggtggtgcgtcagaaggaccgg
cccgaggttctgttccggcagcagctggtggaggataagggtctccacggcggcgcctct
tacatggacttcctgtgctacgtccaccgcgagatccgacagctgctcacctaa
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