Clupea harengus (Atlantic herring): 105904547 Help Entry 105904547         CDS       T09045                                  Name (RefSeq) synaptopodin-2 Organism char  Clupea harengus (Atlantic herring) SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PDZ PDZ_6 Motif Other DBs NCBI-GeneID:  105904547 NCBI-ProteinID:  XP_042566463 Ensembl:  ENSCHAG00000008323 UniProt:  A0A8M1KVF1 LinkDB All DBs Position 18:13187608..13218191 Genome browser AA seq 1876 aa AA seqDB search MQASSSTLLVPLRGVSSLSTARLDASWRAANSGNMGTGDYFCLTVRGGAPWGFSLRQCEG EAHHPIQVDQVVEGSRACLAGVCVDDELVSLNGEPCADLTLLEAITLVDASTDCLKLLIK RACVCSPPPSDSELEGPVGVGASAGSLQSTTLCIPAPQRPHPHRELYICESQDEAYCGET DSDAENQIPAAPAPLLRSQLCVRGLGAPDAQGPKQRVAPVEVPEGGMLELQVSLPRQSLE DPLLAPPLSLEELGCSSLGSARGVEGALLITGGVLEPEAEPGPPLTAGGEVLYVPRRERQ PLGQHGVLVSLPLGQVEVMLQAAGEQGEGEEGGEEGGPSEDNPASCSVSFGILSEESESE SERELNQPNKHHPRHARLRRSESQSEKQVKEAKSKCKRIALLLTATTPHPSNRGVLMFKR HRQRARKYTIVSYGTGDEEPHLYDPDEDGDEDAEDEDEDPGGQQRDERHTVHFTVLASGG GECEVGQRAVVGLLEIERQLLEDMDSLPDTKGKGAVMFAQRRQRMDEIVAEHEDLREKGL PVESIQDVEKHLAYQQMEERAYLQHQESQNYMDVNQHQQQQQQQQHQQYQQYQQEQQYYQ QQQQQYQQQQQQYEQQQYELQQQQYEQQQQQYQQHMQLQQQYTQHMNGTVQSAEMQLAVA NRSAKPFSAPENSTAFTEGQEHAEYSALGHGEQIASRDERIAVPAIKTGILQDPRRRNTP VKPMFSFKEKPKWSPNPELLNLCNRGDRKPGFDSGPEEDYLSLGAEACNFLQAPRVKQKV PPPVAPKPHINPNSPPWSPQPEPDLPPQEMPPHAENNLPVSAEVAPTPGMECPPTSAHLQ PAHDAMMPPQPPSPEEQQAADAAGWSQAEPQAQPGQQPEPWGESQAPQGQPQAPPEPSAD SWVPSQAPQQPPVSGWGVPAEAPAQVPAQPQASWTTQPQPQPQSQPQPQPQPQPQTQPQP QSQPQPQPQAVELPSQMPAERQSQLPWVTHDQGPPAQTQAPMQPPPQAQPSWVTQPPPQP PPATTWAQAPPHMPPPQPHWSQPQPTPQQQSQATSWASGQSQHQPPWAQAALQPPQPQQP QGDSQPLPPWVTPAQVQPQAPAGGWPPSQSPPQAQVPWAPPSPAQPQAAAQPAVGAQWAQ QQQQPQTPQPPWVQPPPAPPTQQMHQAPPMSAWPPTTPAQNQPQPPWAHPAQPPPQHPQQ PQQPQQPQQPQQPQQQPQPQPQQQPQQQPPPPAAPWGPDQNQVQAPWAPPPHAQSQPWAQ QQQQQQPQHPPGAQWSPPTPAHSWGPQNPQQQQQQQRGLATPPIGNHEPPRPTPPPPQRM NSYTLGSKIPPTPSPPCEESPPPFCSAFEIPAIGGKGAELFAKRQTRMEKYVVDSTTVKA HKPPRPTSPSPSLPVTWKYSPNVRAPPPTNYNPMLSPSYPPGAIKQPPSSSPSLKPKGAK GKEKAKPAPKPLHVLDVMKHQPYQLDASLFTYGPAAEALAAKQKVADEAAAAQAAAQAQA QAAAQAQAQAQAQAQAQAQAQQQVQYEHMPPGYGFMPQQQYGMAGPSPAMHDGHYHPANA NAYQQPQMMQQPAYQQQPAYQQPYSQPYTPTAPYQQPPPNTAYPQHQPPHDPYQHPHSAA YPAAPAQQPAAPAPSPAYQPAPPSSYTVPSYPAGAKPDSGSGAGTMAAPKPKFAAKKSAA QAVRSVSLSPPARLPLLPRSSRSTSASPLPRLSAAPADGPSAWTERGHKPPSPWEAASRH PLGLVDEAFAFQNLQQSLASSLRTAAGRKQLPTPPPEWTARVAYEPTPRPLSYSSTLPRS HTPPRSPQPFLSPTKSSASAPASSGLYAAPYRQTPPLRSLTEVSLGPPWVSPSQRPTLTH PRTHSRYQSSYSTWRR NT seq 5631 nt NT seq  +upstreamnt  +downstreamnt atgcaagcctcctcgagtacgctgctcgtgcctctgcgaggagtttcgagtctcagcact gcgcgacttgatgccagttggcgggccgcaaactccggcaacatgggcacgggggattac ttctgcctgacggtacgcgggggcgcgccctggggcttcagcctccggcagtgcgaggga gaggcgcaccaccccatacaagtcgaccaggtggtggagggcagccgtgcgtgtctagct ggagtgtgtgtggacgatgagctggtgtctctgaatggagagccgtgtgctgacctcacc ctcctggaggccatcactctggtggacgcctctaccgactgtctgaagctgctcatcaag agggcatgtgtgtgttcccccccaccctcagactctgagctggagggcccggtgggggtc ggggcatcagctggctccctccagtccaccaccctctgcatcccggcgccccagcgcccc cacccccaccgggagctctacatctgtgagtcccaagacgaggcctactgtggggagacc gacagcgacgctgagaaccagatccccgcggcccccgcccccctgctccgctcccagctc tgtgtgagggggctcggggctccagacgcccagggtccgaagcagcgcgtggccccagtg gaggtgcctgaggggggcatgttggagctgcaggtgtccctgcctcgccagagcctggag gatccgctcctcgccccccccctctcgctggaggagctgggctgctcctctctggggagc gcgcggggggtggagggggcgctcctcatcacagggggggtcctggaacccgaggccgag cctgggccccccctgacggccggtggggaggtgctgtacgtgcctcggagggagaggcag cctcttggccagcatggggtgctagtgagtctgccgctggggcaggtggaggtgatgctg caggctgcaggggagcagggggagggggaggagggcggagaggagggagggcccagtgaa gataaccccgcctcctgctccgtctctttcggaatcctgtcagaggagtcggagtcggag tcggagcgggagctcaaccagcccaacaagcaccatcctcgccacgcacggctcaggcgc agtgagagtcagtcggagaagcaggtgaaggaggccaagtctaaatgcaagcgcatcgcc ctcctgctgacggccaccaccccccaccccagtaacaggggggtgttgatgttcaagagg caccggcagagggccaggaagtacacgatcgtcagctacggcaccggcgacgaggagccc cacctctacgacccggacgaggacggcgacgaggacgcagaggacgaggacgaggaccca ggcgggcagcagagagacgagcggcacaccgtccacttcacggtcctcgccagcggcggt ggagagtgtgaggtcggtcaacgggcggtcgtgggcctgctagagatcgagcgccagctc ttggaggacatggacagtctgcccgacaccaagggcaagggcgcggtgatgtttgcgcag cggcgccagcgcatggacgagattgtggcggagcacgaggacctgcgcgagaaggggttg cctgtggagagcatccaggacgtggagaagcacctggcctaccagcagatggaggagaga gcctacctgcagcaccaggagagccagaactacatggacgtcaaccaacaccagcagcag cagcagcagcagcagcatcaacagtaccagcagtaccagcaagaacagcagtactaccag cagcagcagcaacagtatcagcagcagcagcagcagtatgaacagcagcagtatgagctg cagcagcagcagtatgaacagcagcagcagcagtaccagcaacacatgcagctgcaacag cagtacacgcagcacatgaacggcacagtccagagtgctgagatgcagttggccgtggcc aaccgcagcgccaagcctttctctgcgcccgagaacagcacagccttcacggagggccag gagcatgccgagtactcagccctgggtcatggggagcagatcgcctcccgggacgagcgc atagcggtgcccgccattaagacaggcatccttcaggacccgcgccgccggaacacaccc gtcaagcccatgttctccttcaaggaaaagcccaagtggtcgcccaacccggagctgctc aacctgtgcaaccgcggcgacaggaagccgggctttgactctggccccgaggaggactac ctcagcttgggcgcagaggcctgcaacttcctgcaggcgccccgcgtcaagcagaaggtg ccccccccagtcgccccaaaaccccacatcaaccccaactcgcccccctggtccccgcag cctgaaccagacttgccccctcaggagatgcccccccatgccgaaaacaacctccccgtg tctgcagaggttgcccccacccctggcatggagtgcccccccacatctgctcatctccag ccagcccacgacgccatgatgcccccccagcccccctccccagaggagcagcaggctgca gatgcagcagggtggagccaagcagaaccacaggcccaaccggggcagcagccagaaccc tggggagagagccaggccccccagggccagccacaggcacctccagagccgtccgcagac tcctgggttccctctcaggcacctcagcagccgcctgtaagcggatggggggttcctgcc gaggcacccgctcaggtccctgcccagccgcaggcttcctggacgacccagccacagcca cagccacagtcgcagccacagccacagccacagccacagccacagacacagccacagcca cagtcacagccacagccacagcctcaggctgtcgagctgccttcccagatgcctgctgag agacagagccagctgccctgggtgacgcacgatcagggcccccctgcgcagacgcaggcg cccatgcagcctcccccacaggctcagccctcatgggtaacccagccccccccacagccc cctcctgccaccacatgggcccaggcccccccccatatgccacccccccagccccactgg agccagccccagccgaccccccagcagcagtcccaggccacctcctgggcctctggccag agccagcaccagcctccctgggctcaagcagctctgcagccaccgcaaccgcagcagccg cagggtgactcccagcccctgcccccctgggtcacccccgcccaggtgcagccccaggct ccagccggcgggtggcccccctcccagagccccccccaggcccaagttccctgggccccc ccctccccagcccagccgcaggctgcggcccagccagcggtgggcgctcagtgggcgcag cagcagcagcagcctcagactccgcagcctccttgggtgcagccccccccagcccccccc acccagcagatgcatcaggctccccccatgagtgcctggccgccaactaccccagcgcag aaccagccacagccaccgtgggctcatcctgcccagccacctccccagcatccgcagcag ccgcagcagccgcagcagccgcagcagccgcagcagccgcagcagcagccgcagccgcag ccgcagcagcagccgcagcagcagccgccgcctccagctgccccgtgggggccggatcag aaccaggtacaggccccctgggcccccccaccccacgcgcagtcacaaccctgggcccag cagcagcagcagcagcaaccccagcacccccctggtgcccagtggagcccccccacacct gctcacagctgggggccacaaaacccccagcagcaacaacagcagcagcggggccttgca accccccctatagggaaccacgagcctccccgccccaccccccctccccctcagaggatg aactcctacacgctgggctccaaaatcccccccactccgtcccccccctgcgaggagagt cccccacccttctgctccgccttcgagattcccgctatcgggggcaaaggggcggagctg tttgccaagcggcagacgcgcatggagaagtacgtggtcgactccacgaccgtgaaggcc cacaagcccccgcggcccacctcacccagcccctccctccccgtcacctggaagtactcc ccaaatgtgcgcgcgcctccgcccacgaactacaaccccatgctgtcaccctcgtacccc cccggcgccatcaagcagcccccctcctccagcccttccctcaagcccaagggtgcaaag ggcaaggagaaggccaagcctgcgcccaaaccactgcatgtgctggacgtgatgaagcac cagccctaccagctggacgcctcgctcttcacctacggccccgcagccgaggccctcgcc gccaagcagaaggtcgcagatgaggccgccgcggcacaggctgcagcacaggcacaagct caggcagcagcacaggcacaggcacaggctcaggcacaggcacaggcacaggcacaggca cagcagcaggtccagtacgagcacatgccccccggctacggcttcatgccccagcagcaa tatgggatggctggcccttcccctgccatgcatgacgggcactaccacccagccaatgcc aatgcttatcagcagcctcagatgatgcaacagcccgcctatcagcagcagccagcctat cagcagccctacagccagccgtacacgcccacggccccctaccagcagccccccccaaac acagcctacccgcagcaccagcccccccacgacccctaccagcacccccacagcgctgcc taccctgcagccccggcacagcagcctgcggcccccgccccatcaccagcgtaccagcca gcgccgcccagctcctacacggtgcccagctaccccgcgggtgccaagccggactcgggg tcaggggccggcaccatggcagcgccaaagcctaagtttgccgccaaaaagagcgcagcg caggctgtgaggagtgtgtctctctctcctccagctcggctgcccttactgccccgaagc tcccgctcaacgtccgcctctccgctgccccgcctctccgctgcccctgctgacggcccc tcagcctggacggagcgggggcacaagccgccgtcgccatgggaagccgcctcccggcac ccgctgggcctggtggacgaggccttcgccttccagaaccttcagcagtcgctggcgtcc agcctgaggaccgccgccgggcgcaagcagctgcccaccccgccgccagagtggacggca cgcgtggcctacgagccaaccccccgcccgctcagctacagctccaccctcccccgtagc cacacccctccacgatccccccagcccttcctctcccccaccaaaagctccgcctctgcc cccgcctccagcggcctctacgctgccccctacaggcagactccgcccctgaggtcgctc acggaggtcagtctcggccccccctgggtcagcccatctcaaagacccaccctgacacac ccacgcacccacagccggtatcagtccagttacagcacctggagacgctaa

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