Clupea harengus (Atlantic herring): 105904603
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Entry
105904603 CDS
T09045
Symbol
cdx1b
Name
(RefSeq) homeobox protein CDX-1b
KO
K09312
homeobox protein CDX1/4
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105904603 (cdx1b)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
105904603 (cdx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
105904603
NCBI-ProteinID:
XP_012687960
Ensembl:
ENSCHAG00000009295
UniProt:
A0A6P3W2V0
LinkDB
All DBs
Position
8:688299..692441
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AA seq
264 aa
AA seq
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MQHELELQHGKMYVSYLLDKDPGMYSNTVRHPSLNLNHQNFVPAPPQYSDFTGYHHVPGI
NNDPHHSQAGTWSPAYPPPREEWSPYGPGTAPSTSNPGQISYTPPDFSPVQPPGLLPPSI
NTNVGQLSPNSQRRNPYDWMRRNAPPSNPGGKTRTKDKYRVVYTDHQRLELEKEFHYSRY
ITIRRKSELATSLSLSERQVKIWFQNRRAKERKVNKKKMQQSQPASTTTPTPPGSTMPGN
VAMVTSSSGGLVSPSMPMSIKEEY
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatgagctggagttacaacacggaaagatgtacgtgagttatcttttggacaag
gaccccggtatgtactcaaatactgttagacaccccagtctaaatttgaatcatcagaac
ttcgtaccagcccctccacaatactcggactttacaggataccatcacgtcccgggaatt
aacaatgaccctcatcacagtcaggctggaacctggagcccagcttacccaccgccgcgg
gaagagtggtctccgtatgggccagggacagctccatctacttcaaacccgggacaaata
agttatactccccccgacttttctcctgtccaaccgcctggccttctgccaccttctatt
aacaccaatgttggccagctctctccaaactcgcagcgcagaaatccttacgactggatg
aggcgaaacgcaccgccgtccaacccagggggtaagacgaggacaaaagataagtatcgg
gtggtgtacacagaccaccagcgcctggagctggagaaggagttccactacagtcgttac
atcaccatacgaaggaaatcagagctggccacatcactcagcctctcggaacgacaggtc
aaaatctggttccagaatcgacgcgcaaaagagaggaaggtgaataaaaagaagatgcag
cagtctcagccggcctccacaacaacacccactccacctggctccactatgccagggaat
gttgccatggtgactagcagtagtggaggcctagtgtcaccctccatgccaatgtcaatc
aaagaagaatactaa
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