KEGG   Clupea harengus (Atlantic herring): 105904611
Entry
105904611         CDS       T09045                                 
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105904611 (rbm22)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:char03041]
    105904611 (rbm22)
Spliceosome [BR:char03041]
 Complex B
  Other components
   Prp19-related factors
    105904611 (rbm22)
 Complex C
    105904611 (rbm22)
SSDB
Motif
Pfam: STL11_N RRM_1 RRM_occluded zf_CCCH_4 Torus Nup35_RRM_2 zf-CCCH_2 zf-CCCH zf-CCCH_4 RRM_3 zf-CCCH_10
Other DBs
NCBI-GeneID: 105904611
NCBI-ProteinID: XP_012687973
Ensembl: ENSCHAG00000007414
UniProt: A0A6P3W2V7
LinkDB
Position
8:complement(522834..527621)
AA seq 428 aa
MATSLGANTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDDVPKSDVNKEYYTQN
MEREIAGTDGTRAVGALGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLMRASAMPRLDAPEDKTITTLYVGGLG
DTITDSELRNHFYQFGEIRTITVVPRQQCAFIQFATRGAAESAAEKSFNKLIIHGRRLNV
KWGRSQGSRGKEREKDGVAEGGMRLEPVPGLPGALPPPPVSEEEGPANYFNLGPSSAPTV
MNMGLPPPPGVTMPPPPGFGPPMFHSMDGMGAPMPPPMPLRLPGPVHYPSQDPQRMGAHA
HAARHGGT
NT seq 1287 nt   +upstreamnt  +downstreamnt
atggcgacgtctttaggagctaacacatacaacaggcaaaactgggaagatgcggacttc
ccaattctctgccaaacatgtctaggagagaatccttacattcgcatgaccaaagagaag
tatggaaaggagtgcaagatttgtgcccgtcccttcactgtgttccgctggtgccctggt
gtgagaatgcgcttcaagaagactgaggtgtgccagacatgcagcaaaatgaagaatgtc
tgccagacttgcttgctggaccttgagtatggtctgcccattcaggtccgcgacacaggc
ctttccgtcaaagatgacgtgccaaagtcagatgtgaacaaagaatactacactcagaat
atggagagagagattgccggcacggatgggacgagggcggtgggagcacttggtaaggca
ccgagctccagtgatatgcttctgaagcttgcccgcaccacgccctactacaagaggaac
aggccacacatctgttccttctgggtgaagggagagtgcaagagaggagaggagtgccct
tacagacatgagaaaccaactgatccagatgaccctctggctgaccagaacatcaaggac
cgttactatggcatcaatgacccggttgctgacaaactcttgatgcgggcatctgccatg
cccaggcttgatgctccagaggacaagaccattaccactctttatgtgggaggcctagga
gataccatcactgactcagaactcaggaaccacttctaccagtttggggagattcgtacc
atcacagttgtccccaggcagcagtgtgctttcatccagttcgctacgcgcggggcggct
gagtcagcggctgagaagtccttcaacaagctgatcatccatggccgcagactcaacgtc
aagtggggcaggtcccagggatctcgtggaaaggagagagaaaaagacggagtggctgaa
ggcggcatgcgactggaaccggtgcctggacttcctggagcattgcctccgccgcctgtg
tccgaagaggagggccccgccaattacttcaacctgggccccagcagcgcccctacggtg
atgaacatggggctgccgccgccaccgggggtcaccatgcccccacctccaggctttggt
cctccaatgttccactctatggatggcatgggtgctcctatgcccccgcccatgccatta
aggcttcccggtccggtgcactacccttcccaggatcctcagcgcatgggtgcccatgct
catgcagctcgccatggaggcacatag

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