Clupea harengus (Atlantic herring): 105904688
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Entry
105904688 CDS
T09045
Symbol
polg
Name
(RefSeq) DNA polymerase subunit gamma-1
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105904688 (polg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
char03032
]
105904688 (polg)
03029 Mitochondrial biogenesis [BR:
char03029
]
105904688 (polg)
Enzymes [BR:
char01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
105904688 (polg)
DNA replication proteins [BR:
char03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
105904688 (polg)
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
105904688 (polg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
Motif
Other DBs
NCBI-GeneID:
105904688
NCBI-ProteinID:
XP_012688046
Ensembl:
ENSCHAG00000021087
UniProt:
A0A6P3W2Q3
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All DBs
Position
3:complement(23603532..23612484)
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AA seq
1207 aa
AA seq
DB search
MLRLWLLHYRPRRYPALELRRLRSSSAEPHLEQAPNFPQRRVNPLNIQMMSANLHKQIFR
GLEPVYIQEDVERSIKHLQKHQLWGKEAALLPDVELKLPEMYGSDIDEHFRILAQKQSLP
YLEAASLLQLTQLPPMPQTWAWEVGWSRYGPDGECKRVDFPEENALVFDVEVCMAEGHCP
TLAVAVSPSAWYSWCSKRLIEDRYTWSNQLTPADLIPLETSANSIRPPRGTWLERLVVGH
NVSFDRAYIKEQYMLKGSKVRFLDTLSLHMAISGLTGFQRSLWMASKYGKRKGLQEVKEH
MKKMKRRTEGPKIGSWDWVEISSINNLVDVHALYVGGEPLKKEAREIFVKGSMTDVRDNF
QELMQYCALDVLATHEVFTQQLPLFMERCPHPVTFAGMLEMGVSYLPVNQNWQRYIEDAQ
DTYDELKQEMKKSLIRLADDACQLLEGQRYKEDPWLWDLDWEVQEFKKKKVAQKKKAADT
AKEDKPPAIPSVDWDVDPGPLSEEELNGVDPSKEVLERLKQTVSCLPKRRQHLPGHPSWY
RKLCVKLSESEDWSPGASLISLQMRVTPKLMGLTWDGFPLHYTEQHAWGYLVPGRKDNLD
SDEEELGPVCPHRAIESIYREYCEQKGKEQPQCLDTPLPDDLMLSNSAVWQTAEELGRLD
DVAEDEFVVKSKSRVKKAKELNEYDGPPEESQCPYHHGNGPYNDVNIPGCWFFKLPHKDG
NENNVGSPFSKDFLSKMEDGTLQAGRGGTNATRALEINKMISFWRNAQNRISSQKVVWLR
KGELPRTVSRHNDFDDEGQYGAILPQVITAGTVTRRAVEATWLTASNARRDRVGSELKAM
VQVPPGYHLVGADVDSQELWIAAVLGEAHFAAMHGCTAFGWMTLQGKKSQGTDLHSRTAD
AVGISREHAKVFNYGRIYGAGQPFAERLLIQFNHRLSQPDAASKARHMYSLTKGLRRCQL
NEDGEWLLKELGMEVERADDGSVSMQDVRRIQRTAAQGSRRRRWDIAGKRVWAGGTESEM
FNKLENIALSPEPATPVLGCRISRALEPSAVGDEFITSRVNWVVQSSAVDYLHLMLVAMR
WLLEEHDIDGRFCISIHDEVRYLVCSEDRYRAALALQITNLLTRCMFAYKIGLEDLPQSV
AFFSAVDVDQVLRKEVTMDCVTPSNPTGLERRYGFAQGEALDIYQIMEITKGSLEKGRKQ
DGARTRS
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggttatggttactccactatcgaccacgacggtaccctgcactggagctcagg
aggttgcgaagttcctcggcagagcctcacctggaacaggcgcccaactttcctcagaga
agagtaaacccactcaacatccagatgatgtctgcaaacctgcacaagcagatattccgc
ggattggagccagtatacatacaggaagatgtggagcggagtatcaagcacctgcagaag
catcagctttggggcaaagaagctgcgcttcttcccgacgtggagctgaagttgccagaa
atgtatggcagcgacattgacgaacacttccgtattttggctcagaagcagagtttgcct
tacctggaggcggccagtctgcttcagcttacacagctgcccccaatgccccagacctgg
gcatgggaagtgggatggagtcgctatggaccggacggggaatgcaaaagagtggatttt
cctgaggagaatgccttggtttttgacgtggaggtgtgcatggcagaaggacactgtcct
acactcgccgtagctgtgtccccctctgcctggtactcctggtgcagtaaaagactgatt
gaggacaggtacacttggtctaaccagcttacaccagctgaccttattcctttggagacc
tctgccaactccatccgacccccaaggggtacatggctggaacgactggtagtgggacac
aacgttagttttgaccgtgcttacatcaaggaacagtacatgttaaagggctccaaagtt
cggttcttggatacattgagtcttcacatggcgatatctggactgactgggtttcagcgg
tccctctggatggccagcaagtatggcaagcgcaaaggcctgcaggaagtcaaagaacat
atgaagaaaatgaagagacggactgaggggccaaagattggctcctgggattgggttgag
atcagtagtatcaataacctggttgatgtccatgcactgtatgttggtggagagcccttg
aagaaagaggcccgtgagatatttgtgaagggcagcatgaccgacgtgcgagacaacttt
caggagctcatgcagtactgtgccctggatgtgctggccactcacgaggtgttcactcaa
cagctgccactcttcatggagaggtgccctcacccagtcacgtttgcagggatgctggag
atgggggtgagctacttgcctgtcaatcagaactggcagcgctatatagaggacgctcag
gacacgtatgacgaactgaagcaagagatgaagaagtccctgataaggttggcagatgat
gcctgccagcttctggaaggccagaggtacaaggaagacccctggctgtgggacttggac
tgggaggttcaagagttcaaaaagaaaaaggtggctcaaaaaaagaaggccgcagataca
gccaaagaggacaaaccacctgccattccatcagttgactgggatgtggatcctggcccc
ttgtctgaagaggagttgaatggtgtggaccccagtaaagaagtgctggaaagactgaag
cagacagtcagctgcttacccaagaggagacagcacctgcctggtcatcctagctggtat
cgtaagctgtgtgtgaagctgtcagagagcgaggactggtcaccgggggctagtctgatc
agcctgcagatgagggtgacccccaagctgatggggctgacctgggatggcttccccctg
cactacacggagcagcacgcctggggctacctggtgcctggccgcaaggacaacctggac
tctgacgaggaggaactgggcccagtgtgcccacacagggctatcgaaagcatctataga
gagtactgtgagcagaaaggcaaggagcagccccagtgtttggacacacccttgcctgat
gacctcatgctgagtaacagtgctgtgtggcagacggcggaggagttgggtcgcctggac
gatgtggccgaggatgagtttgtagtcaaaagcaagtcaagggtcaagaaagccaaggag
ctcaacgaatatgatggtccaccagaggaaagccagtgcccttatcaccacgggaacggt
ccatataatgatgtcaatatcccagggtgctggtttttcaaactacctcataaggatggg
aatgagaacaatgtgggcagtcctttctccaaggatttcttgagtaagatggaggacggg
acccttcaggctggcagagggggcacaaatgccactcgggctctggaaattaataaaatg
atctcattctggagaaatgcccagaaccgcatcagttcccagaaggtggtttggctgcgt
aagggagagcttcctcgcactgtgagcagacataatgattttgatgatgagggacagtat
ggtgccatcttgccacaggtcatcactgcaggaacagtgactcgtagggctgtggaggca
acatggctgacggctagcaatgctcggcgtgaccgggtgggcagtgagctgaaggccatg
gtgcaggtgcctccagggtatcacttggtgggggctgacgtggattcccaggaactttgg
atagctgcagttttaggagaggcccactttgctgccatgcatggctgcacagcattcggc
tggatgaccctccaaggcaagaagagtcagggcacagacctgcacagccgcactgcagat
gcggttggcatcagccgcgagcacgccaaggtcttcaactatggccgcatctacggtgcc
ggccagccctttgcagagcgcctgcttatacagttcaaccaccggctcagtcagcctgac
gccgccagcaaggcccggcacatgtactcgctcaccaaaggattacgcaggtgccaactg
aacgaggatggggagtggctgctgaaggagctgggcatggaggtggagagggccgatgat
ggaagtgtctccatgcaggatgtgcgcaggatacagcggacagcggctcaaggttcccgc
aggcgcaggtgggatatagctgggaagcgtgtttgggcaggcggcacggagtcagagatg
ttcaacaagctggagaacatcgccctctcccctgagccagccacccctgtgctggggtgc
aggatctcacgagccctggaaccttccgcagtgggggacgaattcatcaccagccgagtg
aattgggtggtgcagagctcagcggtggattatctgcacctgatgttggtcgccatgcgc
tggctgctggaggagcatgacattgacggacgattctgcatcagcatccatgatgaggtg
cgctacctggtgtgtagcgaggaccgctatcgagcagccctagccctgcagatcaccaac
ctgttgaccagatgcatgtttgcctacaagataggcctggaggacctccctcagtctgtg
gccttcttcagcgcagtcgatgtggaccaggttctgcggaaggaggtgactatggactgt
gtcactccgtccaaccccacgggcctcgagcgcagatacggctttgcccaaggtgaagcc
ttggatatctaccagatcatggagatcaccaagggctcactggagaagggcagaaagcag
gatggagccaggactagatcctaa
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