Clupea harengus (Atlantic herring): 105904752
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Entry
105904752 CDS
T09045
Symbol
abcc8
Name
(RefSeq) ATP-binding cassette sub-family C member 8
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105904752 (abcc8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105904752 (abcc8)
Transporters [BR:
char02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
105904752 (abcc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
nSTAND1
DEAD
AAA_23
Motif
Other DBs
NCBI-GeneID:
105904752
NCBI-ProteinID:
XP_031421297
Ensembl:
ENSCHAG00000017040
UniProt:
A0A6P8FDI3
LinkDB
All DBs
Position
3:32179659..32235085
Genome browser
AA seq
1583 aa
AA seq
DB search
MSLAFCGNENNSAAYNVDGGVLNNGCFLDALTVVPHVFLLFITFPILFIGWGSQSSKVHI
HHSTWLHFPGHNMRWILTFILLFVLVCEIAEGIVSDGFTQSHHLHLYMPSALAFMAAITS
VVYYHNIETSNFPKLLLVLFVYWVLAFVTKTLKFAKYTEHGVGMGQLRFCITGLLALLYG
LLLAVEGNVILGRRYVCFEDPTEVKPPEDLQDLGVRFLQPFVNLVSKSTYWWMNTFITNA
HRRPIDLKVLGKLPIAMRAITNYLKLRKAFETQRRLQGIQPQGPKWIWRALRKAFGRPLI
LSIIFRFMADLLGFAGPLCISGIVHHISKENRTIQSPVQLLGVYFISSREFLANAYVLAV
LLFSALLLQRTFLQASYYVAIETGINLRGAIQTKLYNKIMRLCTSNMSMGEMTVAQICNL
VAIDTNQLMWFFFLCPNLWAMPVQIVVGVILLYYLLGISALIGAAVIAILAPVQYFVATK
LSQAQKSTLEYSSERLKKTNELLRGIKLLKLYAWEHIFCRSVEETRQKELTSLQTFALYN
SVSIFMNAAIPIAAVLTTFVVHVHISEDASLSPAVAFASLSLFHILVTPLFLLSSVVRST
VKALASVQKLSEFFSCEEIGEEPEPRTTLPPASSNHSKYQALPLKVVNRKRPGREDWNNF
GLQRDLEEEALMLEDEDTCIKISNGFFTWVDGPHTLSNISIRIPFGQLTMIVGQVGCGKS
SLLLAALGEMQKISGSVAWISLPNLDSEGDESPTVKDTAGDGDIRKRGSVAYASQKPWLL
NATLVENITFEMPLIKERYKTVIDACSLQPDIDILPQGDQTEIGERGIILSGGQRQRISV
ARALYQSTNVVFLDDPFSALDIHLSDHLMQDGILKLLREEKRTVVLVTHRLQYLPHADWI
IAMKDGSIQTEGTLKDIQTAEPELFGQWKTLMNRQDQEFEKETVEDNMTALERKNLRRTM
YSREAPKTVDEDEEESTESDEEEILSQVMRHRTTIPWKSFGRYLSSAGLLLLSLLLLSQL
FKHSLMVAIDYWLAHWTSHVISAKIQAAAHNCTSAQECGFSHSSYLMVFSVLCCLGIVLC
LITSVAVEWTGLRVAKELHHNLLNTIILAPMRLFETTPLGSLLNRFSTDTNTIDQHIPAT
LECLSRSTLLCFSALGVISFVTPVFLFALAPLALACYFFQKYFRVASRDLQQLEDSTQLP
LLAHFSETVEGLTTIRAFRYEARFRQKLLELTDANNIASLFLTAANRWLEVRMEYIGACI
VLIAAVASITNAIDNHLSTGLVGLGLTYALLVSNYLNWMVRNLADIEVQMGSVRRISGLL
KTEPESYGGLMSASQVPDGWPHQGEIQIQNLSVRYDSTLKPVLKNVNAHICPGQKVGICG
RTGSGKSSFSLAFFRMVDTFEGRIFIDGIDIAQLPLQTLRSRFSIILQDPFLFSGTIRFN
LDPENKASDSMLWEALEIAQLKSVVKTLPGGLDAMVTEGGENFSQGQRQLFCLARAFVRK
SSILIMDEATASIDMATESILQKVVMTAFSDRTVVTIAHRVHTILNADLVIVMKRGIILE
YDKPEVLLEREDSVFASFVKADK
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggcgttctgtggcaatgagaacaactctgccgcctacaatgtggacggcggg
gtgctcaacaacggctgcttcctggatgccctcaccgtggtgccccatgtgtttctgctc
ttcatcaccttccccatcctcttcatcggctggggcagccagagctctaaggtgcacatc
catcacagcacttggctgcacttccccgggcacaacatgcgctggatccttaccttcatc
ctgctcttcgtgctggtgtgtgagatagcggagggcatcgtctctgacgggtttactcag
tcgcatcacctgcacctctacatgccctcggccctggctttcatggctgccatcacctcc
gtagtgtactaccacaacatcgagacctccaacttccccaagctcctgctggtgttgttc
gtgtattgggtgttggcgtttgtgaccaagaccctgaagtttgccaagtacacggagcac
ggcgtgggcatggggcagctgcgcttctgcatcacggggctgctggcactgctctacggg
ctgctgcttgccgtggaaggcaacgtcatcctgggcaggcgctacgtctgcttcgaggac
cccacagaggtcaagcccccagaggaccttcaggacctgggcgtccgattcctgcagcca
ttcgtcaaccttgtgtccaaaagcacatactggtggatgaatacattcattactaatgca
caccgccgtcccatcgacctcaaggtccttggcaagctccccattgccatgcgagccatc
accaactacctgaagctacgcaaggccttcgagactcagaggaggcttcagggcatccag
ccccaggggcccaagtggatctggcgggccttgcgaaaggccttcgggaggcccctgatc
ctcagcatcatcttccgcttcatggctgacctactgggcttcgccgggccactctgcatc
tcagggatcgtccaccacatcagcaaagagaaccgcaccatacagtcaccggtgcagctg
ctgggggtgtacttcatatcgtcgcgggagttcctggccaacgcgtacgtccttgccgtg
ttactcttctccgccctgctgcttcagaggaccttcctccaagcctcctactatgttgcc
atagagaccggcatcaacctgagaggcgccatacagacgaagctctacaataagatcatg
cgtctgtgcacgtctaacatgtcaatgggtgagatgaccgtggcccagatatgcaacctg
gttgccatcgacaccaaccagctgatgtggttcttcttcctgtgtccgaacctctgggcc
atgccagttcagattgttgtgggagtgatactcctgtactacctcttagggataagtgcc
ttgattggagccgccgttattgcaatcctggccccagtgcagtactttgtggcgaccaaa
ctgtctcaagcacaaaaaagtactttggagtactcgagcgagcgtctgaagaagaccaac
gagctgctgaggggaattaagctgctgaagctctatgcctgggagcacatcttctgccgc
agtgtggaggagacgcgccagaaggagctcaccagcctccagacctttgccctctacaac
tctgtctctattttcatgaatgcggccatcccaattgcagcagttctcactacgtttgtg
gtccatgttcacatctcggaggatgcgagtctgtccccagcagtagcgtttgcatccctg
tccctcttccacatcctggtcacgccactcttccttctgtccagcgtggtgcgctccact
gtcaaagccctagccagtgtgcagaagctgagtgagttcttctcctgtgaagagattggt
gaagagccggaacccaggaccacacttccccctgcctcctccaaccacagcaagtaccag
gccctgcctcttaaggtggtgaaccgcaagcgcccaggccgggaggactggaacaacttt
gggctccagagagaccttgaggaggaggcgctcatgctggaggatgaggacacatgcatc
aagattagcaatggattcttcacctgggttgatggaccccacacattgtcaaatattagc
ataaggattccatttggtcagctgaccatgattgtggggcaggtgggatgtggcaagtcc
tctctgctgctggccgccctaggagagatgcagaagatctctggcagtgtagcctggatc
agtcttccaaacctggactcagaaggtgatgagagccccacagttaaagacacagccgga
gatggcgatatcaggaagaggggctctgtggcctacgcttcccagaagccctggctcctg
aatgccaccctggtggagaacatcacctttgagatgcccttgatcaaagagagatataag
acggtcatagacgcctgctccctgcaaccggatatcgacatcctgccacagggagatcag
actgagatcggcgagaggggaatcatcttgtcaggaggtcagcggcaacgcattagcgtg
gcaagagccctgtaccagtctactaatgtggtctttctggatgaccccttctctgccctg
gatatccacctgagcgaccaccttatgcaggacggcatcctgaagctgctgagggaggag
aagaggacggtagtgctggtcacacacaggctgcagtaccttccccacgccgactggatc
attgccatgaaggacgggagcatccagacagagggcacgctgaaggacatccagactgcc
gagccagagctctttgggcagtggaagaccctcatgaaccgacaggaccaggaatttgag
aaggagacagtggaggacaacatgacggcactagagaggaagaacctacgcaggaccatg
tactcacgtgaggctccgaagaccgtggacgaggatgaagaggagtctacggagagcgac
gaggaggagatcctgtcgcaggtgatgcggcaccgcaccaccatcccgtggaagtcgttc
gggaggtacctgagctcggcgggcctgctgctgctgtcgctgctgctgctgtcgcagctc
ttcaagcactcgctcatggtggccatcgactactggctcgcccactggacctcacacgtc
atcagtgccaagatccaagcggccgcacacaactgcacctcagcacaggagtgtggtttc
agccactcatcatacctaatggtgttcagtgtgttgtgctgcctgggcattgtcctgtgc
ctgatcacctcagtggcggtggagtggacagggctgcgtgtggccaaggagctccaccac
aacctgctcaacaccatcattctggcccctatgaggctgtttgagacaactccactggga
agcctcctgaacaggttttcgactgacacaaacaccatcgatcagcacatccctgccact
ctcgagtgtttgagtcgctccacactgctgtgtttctctgcgttgggcgtcatctccttc
gtgactcccgtctttctgttcgcactggcaccactggccctagcctgctacttcttccag
aaatacttcagagtggcctccagggacctgcagcagctggaggattccacccagcttcct
cttctggcccacttctcggagacggtggagggactgaccaccattcgagcgttcagatac
gaggccagattcaggcagaagcttctggagctcacagatgccaacaatattgcttctctc
ttcctcaccgcagccaatcgctggcttgaagttcggatggagtacattggggcttgtatt
gtgcttattgctgccgtggcctccatcactaacgctatagacaaccatctgtccactgga
ctggtaggactgggcctcacatatgcactattggtgtccaattacctgaactggatggtg
cgtaacctagcggacatcgaggtccagatgggctcggtccggcggatcagtggcctgctc
aagaccgagccggagagctacgggggcctcatgtcggcgtctcaagtgccagacggatgg
ccacatcagggggagattcagatccagaacctgagtgtgcgttacgacagcactctcaag
cccgtcctcaagaacgtcaacgcccatatctgccccgggcaaaaggttgggatctgtggc
cgaactgggagcggcaagtcttccttttcactggccttctttcgcatggtggacacattt
gagggacgaatcttcatagatgggattgacatcgcacagctgcctctgcaaacgctgagg
tcacgcttctccataatactgcaggatcccttcctgttcagcgggaccatacggtttaac
ctggacccagagaataaggcatccgacagcatgctgtgggaagccctggagatcgcccag
ctcaagtctgttgtgaaaaccttgcctggaggactagatgcgatggtgacggagggtggg
gagaacttcagtcagggccagaggcagctcttctgcctggcccgagcatttgtacggaag
agtagcatcctcatcatggacgaggccactgcctccatagacatggctacggagagcatt
ctgcagaaagtggtgatgacggctttctctgataggacagtggtaaccatagcgcatcgt
gtccacaccatcttgaacgctgacctggtcattgtcatgaagcgagggatcatcctggag
tatgacaagccagaggtcctgctggagcgggaggacagtgtttttgcctcgtttgtcaag
gcagacaaataa
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integrated database retrieval system
