Clupea harengus (Atlantic herring): 105904818
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Entry
105904818 CDS
T09045
Name
(RefSeq) rho guanine nucleotide exchange factor 26
KO
K13744
Rho guanine nucleotide exchange factor 26
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char05100
Bacterial invasion of epithelial cells
char05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105904818
05100 Bacterial invasion of epithelial cells
105904818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105904818
Membrane trafficking [BR:
char04131
]
Endocytosis
Macropinocytosis
Others
105904818
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
105904818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_2
SOS1_NGEF_PH
SH3_9
RHG20_PH
PH
ECT2_PH
Motif
Other DBs
NCBI-GeneID:
105904818
NCBI-ProteinID:
XP_012688207
Ensembl:
ENSCHAG00000022814
UniProt:
A0A6P3W2W4
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All DBs
Position
9:complement(18892646..18920005)
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AA seq
933 aa
AA seq
DB search
MPLTMDYGNEVDLSNNIFPLWKRRPNTGSRDLKLKPRPLSYQIDGVHTTDFPVEDKSAFT
LTQPAEKLVATPAGSTMVLTHVLNKPSRKTRVVRSISIGHLSNGRFSLSKNKHEVDKHCT
GSNGNRIAGTTRMANGASVCQDVKPSWADNKNLSSPLTVMSQSDQIVFGNSASSPDHMRM
TYRPHSLSVTPQCQHEDTGASSPSFPASSRSSSSSIMSLSSTPSTISDPPTPRTPSPEDG
VSGGVLPRQPPNSSPVSEGKHPPSVVLSTQSPAAQKMGTQQLIPQGLASDIRPPKTGHFG
AQSKGSGGLLDPGKRAQRARSLVETGSFFSTTTEREEGAEGVESPGLLRRGLRSTSYRRA
VVSGVDLEVPPTDLKAKRLSQPVLRGVLEDPSSPGKHPSSPGKHPSSPGKHPSSPKNKSP
DKKRGIPSQRTFDSEEDEVLYQNYQEKALHNDSDEDAESREPKSDDRIVVQYKPIRTSWS
QLSVVKKTGAAERLSPEDRKRQETIFEVISSEHSYLHSLEILIRMFKNSAELGETMTKTE
NHHLFSNILDVCAASKKFFKELEDRHQQNIVIDDISDIVERHAQSNFDPYITYCSNEVYQ
QRTLQRLVMKNPSFKEVLTRIEAHPDCRNLPMISFLILPMQRVTRLPLLMDTICQKTPKS
TDQYEACKKVLQDVSKLVRKCNEGARTMERTEMMYTINSQLEFKIKPFPLVSSSRWMVKR
GELTAFAEENGIFLKRTSRQQVYFFLFNDVLIVTRKKSEESYTVIDYALRAEIWVGQCQA
EDLNLSPVRTTASMLTSRQGTANHLFRLKFRSNYSGDKVTMILGVEQLNERARWISALGL
TNSDKNNMDRTNMVQVEVTRTYTSRQPEELSLQVADVVLVSQMVDDGWYEGERLRDGERG
WFLAECAERITCQAAIERNWQRMDRLQGLETNV
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgccactcacgatggactacgggaacgaggtggatttatcaaacaacatctttccgctt
tggaagagacgtcccaacactggttctagagacttgaaactaaaacctcgacctctgagt
taccagatcgacggggttcatacgacggattttcccgtggaggacaaaagtgcgtttact
ctgactcagcccgcagaaaagctagttgcaacgccagctggaagcaccatggtcctgaca
catgtcttaaacaaaccaagtcggaaaacacgggtggtaagaagcatcagcattggacat
ttatccaacgggagattttctctttctaaaaacaaacatgaggttgacaaacactgcaca
ggtagcaatggaaaccgcattgctggtacaaccagaatggcaaacggggcctctgtgtgt
caggatgtcaagccttcttgggctgacaacaagaacctctccagcccactcactgtcatg
tcgcagagtgaccagatcgtttttgggaattcggcatcctctccagaccacatgcggatg
acatacagacctcacagcctgagtgtcacgcctcaatgccaacatgaggacactggggct
tcttccccctctttccccgcctcctcccgcagctcatcctccagcatcatgtccctgtcc
tccaccccgagtaccatctctgatccgccgacaccccgcaccccatcaccagaagatggg
gtgtctggtggggtgcttccacgccagcctccaaattcctccccggtgtctgaggggaag
caccccccttctgtcgtcctgagcacccagagtcctgctgcacagaaaatgggcacccag
cagctcatcccccaggggctggcatcagacatccgccctcctaaaaccggacactttggt
gctcagagcaagggctccggtgggctcctggaccctggcaaacgggctcagcgggcccgc
agccttgtggagaccggctccttcttctccacgaccactgagcgagaggagggcgctgag
ggggtggagagccccgggctgctcaggagagggctgcgctccacgtcttacagacgggcg
gtggtgagcggggtggatctggaggtgccccctactgatctcaaggccaaacgcctctca
cagcctgtgctcaggggggtgcttgaagacccatccagccctgggaaacatccatccagc
ccggggaaacatccatccagcccagggaaacatccatccagcccgaagaacaagagtccg
gacaagaaaagaggcattccgtcgcagcggacgtttgacagtgaagaggacgaggtcttg
taccagaactaccaggagaaagccctgcacaacgactctgacgaggatgcagagtctagg
gagcccaagtctgacgatcgtattgtggtccagtacaagcccattcgaacgtcctggagt
cagctcagtgtggtgaaaaagactggagctgctgagaggttaagcccagaggatcggaag
aggcaagagaccatctttgaggtgatctcttcagagcacagctacctccacagtctggaa
atcctgatccgcatgttcaagaactcggcagaactcggcgagaccatgaccaagacggag
aaccaccacctgttctccaacatcttggatgtgtgcgcggccagtaaaaagttctttaag
gagttggaagaccgacaccagcagaatatagtcattgatgatatcagtgacattgtggaa
agacacgcccagtcgaactttgacccctatataacatactgctccaatgaggtgtaccaa
caaaggacccttcagaggcttgtaatgaagaacccgtcgtttaaggaggttctgacccgt
atcgaggcccaccccgactgcaggaacctccccatgatctccttcctgatcctgcccatg
cagcgtgtcacccgtctccctctgctcatggatactatctgtcagaagacccccaaaagc
acagaccagtacgaggcctgtaagaaggtcctccaggatgtcagcaagcttgtgcgaaaa
tgtaacgagggtgctcgtactatggagaggactgagatgatgtacaccatcaactctcag
ctggagttcaagattaagccgttccctctggtgtcctcctcccgctggatggtaaagcgc
ggtgagctgacggcttttgcggaggagaacggtatcttcctgaagaggacgtcacgccag
caggtctacttcttcctcttcaacgacgtgctcatcgtcaccaggaagaaaagtgaagag
agctatacagtgattgactacgctctgcgggctgagatctgggtggggcagtgtcaggca
gaggacctgaacctgtcgccggtgcggaccactgccagcatgctgacatcacgccagggc
acagccaatcatctcttccgcctcaagtttcgaagcaactactcaggagacaaagtgacg
atgatcctcggtgtcgagcaattgaatgagcgcgctcggtggatcagtgcccttggcctc
accaacagtgacaagaataacatggatagaacaaacatggtgcaggtggaggtcaccagg
acgtacacatccagacagccagaagagctctcgctccaggtggcagatgtggtgctggtg
tcacagatggtggatgatggctggtatgagggagagcgtctgcgggacggggagagaggc
tggttcctggccgagtgtgccgagcgcatcacctgccaggccgccatcgagaggaactgg
cagagaatggaccgcctgcagggcctggagaccaacgtgtga
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