Clupea harengus (Atlantic herring): 105904921
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Entry
105904921 CDS
T09045
Symbol
vps45
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105904921 (vps45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105904921 (vps45)
Membrane trafficking [BR:
char04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
105904921 (vps45)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
NLRC4_HD
CcmH
Motif
Other DBs
NCBI-GeneID:
105904921
NCBI-ProteinID:
XP_012688326
Ensembl:
ENSCHAG00000010188
UniProt:
A0A6P3W3Q8
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All DBs
Position
19:8565939..8576414
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AA seq
569 aa
AA seq
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MNVTLAVKQYVSKMIESSGPGMKVLLMDKETTSIVSVVYTQSEILQKEVYLFERIDSQNR
DSMKHLKAICYLRPTKENVEHLIQELRRPKYSVYFIYFSNVISKSEVKALAEADEQEVVA
EMQEFYGDFIAVNPHVFSLNLSGVARGRSWEPSMLGRTTQGLTSVLLALKKCPMIRYQLS
SDMAKRLAESVKQIITKEYELFDFRKTEVPPLLLILDRNDDAITPLLNQWTYQAMVHELL
GLNNNRIDLSRVPGISKDLREVVLSAENDEFYANNLYLNFGEIGTNIRNLMEDFQKKKPK
GQQKLESITDMKAFVENYPQFKKMSGHVSKHVTVVGELSRLVSERCLMEVSEVEQELACQ
NDHSNAQQMVRRLLQHPRVCDLDAARLVMLYALRYEKHSNNILSSLMDDLQRKGVSERNR
KMIQSVVEYGGKRVRGSDLITPTDAVAITKQFFKGLKGVENVYTQHQPLLHDTLDQLIKG
RLKDSQFPYLGPSSLRDRPQDIIVFIIGGATYEEALAVYNLNRTMPGVRIVLGGTTIHNT
TSFLEEVRSASSGGQSGHPQGMGRNPNRR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcactctcgctgtcaaacagtatgtctcgaaaatgatcgagagcagcgggcca
ggcatgaaggttctgctgatggataaagagacgaccagcatcgtcagtgtcgtctacact
cagtcagagatcttacagaaggaagtctacctttttgaacgcattgattcacagaatcga
gacagcatgaagcatctcaaggctatttgctaccttcgaccaactaaggagaatgtggag
catctgattcaagagctgcggcggccaaaatacagtgtctacttcatctacttcagtaac
gtcatcagtaagagtgaggtgaaagccctagcggaagctgatgaacaagaggtggtggca
gagatgcaggagttctatggggacttcattgctgtgaaccctcacgtgttctctctcaac
ctcagcggagtagccagaggtcgtagctgggagcctagtatgcttggtcgtaccacccag
ggactgacgtcagttttgttggccctgaagaaatgccccatgatccgctaccagctgtcc
tcagacatggccaagaggcttgcagagtctgtgaagcaaattattaccaaggagtacgag
ctgtttgactttagaaagacagaagtgcctccactgctgctcattctggaccggaatgat
gacgccatcacccctctcctcaaccagtggacatatcaggccatggtgcacgagctcctg
ggcttgaacaacaaccgcatagatttgtccagagttccaggcatcagcaaagacctgcga
gaggttgtgctctccgcagaaaacgatgagttctatgccaataatttgtacttgaacttt
ggtgagattggaaccaacatcaggaacctgatggaggactttcaaaagaagaagcccaaa
ggccagcagaaactggagtccattaccgacatgaaggccttcgtagaaaactaccctcag
tttaagaagatgtcgggccacgtgtccaagcacgtgacggtggtgggcgagctgtcacgg
ctggtgagcgagcgctgcctgatggaggtgtccgaggtggagcaggagctggcctgccag
aacgaccacagcaacgcgcaacagatggtgcgtcgtctgctgcagcacccgcgggtgtgt
gacctggacgccgcgcggctggtcatgctctacgccctgcgctacgagaagcacagcaac
aacatcctgtcctcgctcatggacgacctgcagcgcaagggtgtgtcggagcgcaaccgc
aagatgattcagtccgtggtggagtacggaggcaagcgagtgagaggaagtgacctcatc
acccccacagacgctgtggccatcactaagcagttcttcaaagggctcaagggagttgag
aatgtgtacactcagcaccagcccttgctgcatgacactctggaccagctgattaaaggt
cgactgaaggacagccagttcccatacctggggccgagctccctcagagaccgcccacag
gacatcatcgtgttcatcatcggcggagccacctatgaagaggccctggccgtgtacaac
ctgaaccgcaccatgcctggcgtccgcatcgtgctggggggcaccaccatccacaacacc
accagcttcctggaggaagtgaggtcggcaagcagtggaggccagagtggacacccacaa
ggaatgggtcgtaacccgaaccgacgttga
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