KEGG   Clupea harengus (Atlantic herring): 105904961
Entry
105904961         CDS       T09045                                 
Symbol
raf1b
Name
(RefSeq) RAF proto-oncogene serine/threonine-protein kinase isoform X1
  KO
K04366  RAF proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04010  MAPK signaling pathway
char04012  ErbB signaling pathway
char04068  FoxO signaling pathway
char04140  Autophagy - animal
char04150  mTOR signaling pathway
char04210  Apoptosis
char04218  Cellular senescence
char04270  Vascular smooth muscle contraction
char04370  VEGF signaling pathway
char04371  Apelin signaling pathway
char04510  Focal adhesion
char04540  Gap junction
char04625  C-type lectin receptor signaling pathway
char04810  Regulation of actin cytoskeleton
char04910  Insulin signaling pathway
char04912  GnRH signaling pathway
char04914  Progesterone-mediated oocyte maturation
char04916  Melanogenesis
char05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    105904961 (raf1b)
   04012 ErbB signaling pathway
    105904961 (raf1b)
   04370 VEGF signaling pathway
    105904961 (raf1b)
   04371 Apelin signaling pathway
    105904961 (raf1b)
   04068 FoxO signaling pathway
    105904961 (raf1b)
   04150 mTOR signaling pathway
    105904961 (raf1b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    105904961 (raf1b)
  09143 Cell growth and death
   04210 Apoptosis
    105904961 (raf1b)
   04218 Cellular senescence
    105904961 (raf1b)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    105904961 (raf1b)
   04540 Gap junction
    105904961 (raf1b)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    105904961 (raf1b)
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    105904961 (raf1b)
  09152 Endocrine system
   04910 Insulin signaling pathway
    105904961 (raf1b)
   04912 GnRH signaling pathway
    105904961 (raf1b)
   04914 Progesterone-mediated oocyte maturation
    105904961 (raf1b)
   04916 Melanogenesis
    105904961 (raf1b)
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    105904961 (raf1b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    105904961 (raf1b)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:char01001]
    105904961 (raf1b)
Enzymes [BR:char01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     105904961 (raf1b)
Protein kinases [BR:char01001]
 Serine/threonine kinases: TKL group
  RAF family [OT]
   105904961 (raf1b)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase RBD C1_1 Kinase-like ABC1 zf-RING-like Pkinase_fungal C1_2
Other DBs
NCBI-GeneID: 105904961
NCBI-ProteinID: XP_031424288
Ensembl: ENSCHAG00000015158
UniProt: A0A6P8F703
LinkDB
Position
5:28707367..28728659
AA seq 678 aa
MAMEHIQGAWKTLSNGFGFKDSVFEDACMSPTIIKGFPYQRRASDDGKIPDSTKTSSTIR
VYLPNHQRTVVNVRPGMTLHNCLIKALKVRGLQPECCAVFRLHPGQRSRKTRMDWNTDST
SLIGEELLVEVLDHVPLTTHNFVRKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTK
VPTMCVDWSNIRQLLLFPNPGEGGGPSLPPLTTRRMRDSLSRFPVSSHHRHSTPHAFNYI
TPYPPSGPALSHRQRSTSTPNVHMVSTTLPVDSAAFELDRLKAPASSWCRRFCQRRRVGT
VCFSNPLIDATQEHPEKDALKGHESGSPPNVSPTGWTPSRAPAPMHREKAASSNTQEKNR
IRPRDKRDSSYYWEIEASEVVLHSRIGSGSFGTVYKGKWHGDVAVKILKVTDPTPEQFQA
FRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCDGSSLYKHLHVQETNLQMFQLIDIA
RQTAQGMDYLHAKNIIHRDMKSNNIFLHESLTVKIGDFGLATVKARWSGSHQVEQPSGSI
LWMAPEVLRMQDNNPYSFQSDVYSYGVVLYELMTGELPYSMIANRDQIIYMVGRGYLSPD
LSKLYKGCPKAMKRLVADCIKKSRDDRPLFPQILSSIELLQHSLPKINRSASEPSLHRAT
HTEAINACTLTSTRLPVF
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggcaatggagcacattcaaggagcctggaagactctcagcaacgggttcgggttcaag
gactctgtgttcgaggacgcctgcatgtcccccaccatcattaaaggcttcccctaccag
agacgagcgtcagacgacgggaagatcccagactccaccaaaacaagcagcacaatccga
gtgtacctccccaatcaccagcgcactgtggtgaatgtgcgtcctgggatgaccttgcac
aactgcctaatcaaagctctcaaggtcagggggcttcagccagaatgttgtgctgtcttc
agactacatccaggacagagaagtagaaaaacccgcatggattggaacacagactcgacc
tcactcatcggagaggagctgctggtagaagtgttagaccacgtacctctgacaacgcac
aattttgttcggaaaacatttctgaagttggccttctgtgacatctgtcagaagttcctg
ctcaacggcttccgatgccagacttgtggctataagttccatgaacactgcagcaccaaa
gtccccaccatgtgtgtcgactggagcaacatccgtcagctcctgttgttcccaaaccca
ggtgaaggcgggggtccgtcccttccccctctcacaacccgtcgcatgagagactctctg
tccaggttccctgtcagctctcatcacagacattcaacgcctcacgcctttaactacatc
acgccctacccgccctcaggacccgccctctcccatcgccagaggtcaacgtcaacgccc
aacgtccacatggtcagcaccaccctgcccgtggacagcgccgccttcgagctagataga
ctgaaagcccctgctagctcctggtgccggcgcttctgccagaggagaagagtagggact
gtttgtttctccaaccctttaattgatgccacccaagaacaccccgaaaaggatgcatta
aaaggtcatgagtctgggagccctccaaatgtgagccccaccggctggaccccgtcaaga
gccccagctcccatgcacagggaaaaagctgcctcatccaacactcaggaaaagaaccga
atccgtccaagagacaagagagactccagttactactgggagatcgaggccagtgaggtg
gtgctccactcccggataggctctggctcgtttgggaccgtctacaaagggaagtggcat
ggtgatgtagcagtaaaaatcttaaaggtcaccgaccccacaccagagcaattccaggcc
ttccgcaatgaggtggctgttctcaggaagactcgacatgtcaacatcctgttgttcatg
gggtacatgacgaaggacaatctggccattgtgacccagtggtgtgatggtagcagcctg
tacaagcacctgcacgtccaggaaaccaacctccagatgtttcagctgattgacattgcg
aggcagacagctcaaggcatggactatttgcatgcaaagaatatcattcatcgagacatg
aaatcaaacaacatctttcttcacgagagtctgactgtgaagatcggggactttggcctg
gccacagtgaaggccaggtggagtggctctcatcaggtggaacagccctcaggatctata
ctgtggatggctccagaggtacttcggatgcaggacaataacccatacagtttccagtct
gatgtgtactcctatggagtggtcctctacgagctgatgacgggggagctgccctattcc
atgatcgctaacagagaccagattatctacatggttggacggggctacctctctccagac
ctcagtaagctgtacaagggctgccctaaagccatgaagaggcttgttgctgactgcatc
aagaagtccagagatgacaggccgttgttcccacagatcctgtcctccatcgagctcctg
cagcactccctgcccaaaatcaaccgcagcgcctccgagccctccctgcaccgagccacg
cacacggaggccatcaacgcctgcactttgacctccacgcgacttcccgtcttttaa

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