KEGG   Clupea harengus (Atlantic herring): 105904964
Entry
105904964         CDS       T09045                                 
Symbol
dus3l
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X1
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:char03016]
    105904964 (dus3l)
Enzymes [BR:char01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     105904964 (dus3l)
Transfer RNA biogenesis [BR:char03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    105904964 (dus3l)
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf_CCCH_4 zf-CCCH DUF3408 FMN_dh
Other DBs
NCBI-GeneID: 105904964
NCBI-ProteinID: XP_012688384
Ensembl: ENSCHAG00000012827
UniProt: A0A6P3W4Y8
LinkDB
Position
19:8942744..8948980
AA seq 638 aa
METTTETSQTTSSNGVEKGCSAIKPQYLTSKEKFHELVDSGWKGGKKDTNEATGPVEEKT
EEPEEKRIKLDNKVQQEEDKQNKKRIRGQNKSRPHKKPQSYDDRRLCPSIIQERETKCVY
GDKCKFFHNIADYMASKPADIGEKCYLYDTFGKCHYGVTCRFAKAHTGPDFKNLVNEEVF
KASKERTPVKNHLDKDLQWRLRKRQVPFNATEAYLKTISKGKAQGNNKNTDAAEKDTTDS
CCPGEAQNQPTELDSTANVKDTEQVSDKRVGALTDVDLVKLRPCEKKQVDFSDKLYLAPL
TTCGNLPFRRVCKRFGADITCGEMAMCTNLLQGQTSEWALLKRHESEDLFGVQLEGCFPD
TMTRCAELLNDNIDVDFVDINSGCPIDLVFKKGGGCGLMMRTNKFEQIVRGMNSVLDVPL
TVKIRTGVQEKTNIAHKLIPELKKWGASLITLHGRSREQRYTKSADWDYIDTCSKLASPI
PLFGNGDILSWEDAMKARETGVSGLMVARGALIKPWIFTEIKEKRHWDITSSERLDVLRD
FTHFGMEHWGSDTQGLEKTRTFLLEWLSFLCRYIPVGLLERVPQKINERPPFYMGRDYLE
SLMASHYVEDWVKISELLLGPVPKNFSFLPKHKANAYK
NT seq 1917 nt   +upstreamnt  +downstreamnt
atggagacgaccacagaaacttcacaaaccacctcttcaaatggggttgaaaaaggatgt
tccgctataaaaccacaatacctcacatccaaggagaagtttcatgagcttgtggattca
gggtggaaagggggcaaaaaggacacaaatgaagctactggtccagtagaggaaaagact
gaagagccagaggagaagaggataaaactggataataaggtgcaacaagaggaggataaa
caaaacaaaaagaggattcgcggtcaaaataagtctaggcctcacaagaaacctcaaagc
tatgatgaccgaagactctgcccctcaatcatacaggaacgtgaaacaaaatgtgtatat
ggtgacaaatgcaaattcttccacaacatcgctgactatatggcctctaagccagctgac
attggagagaaatgctacctctatgacaccttcgggaaatgccactatggtgtgacttgt
cggtttgccaaagcccacaccggacctgacttcaagaacctcgtgaacgaggaagtgttc
aaggcgagcaaggaaaggacaccagtcaagaaccatctggacaaagacctgcagtggcgt
ctgcgcaagaggcaagtgcctttcaacgcaactgaggcgtacctaaagaccatcagcaaa
ggcaaagcccagggcaataacaagaatacagatgctgctgagaaggacactacagacagt
tgctgccctggtgaggcccagaatcagcccacagaattggatagcactgcaaacgtgaag
gacacagagcaggtttccgacaagagagttggagcattgacagatgttgaccttgtaaag
ctgcgtccttgtgagaagaagcaggtggatttcagtgataagttgtacctagctccctta
acaacatgtgggaatcttcctttccggcgtgtctgcaagcggtttggtgctgacatcacg
tgtggggagatggccatgtgcactaacctgcttcagggccagacctctgagtgggccctc
ctgaagaggcacgagagtgaggacctctttggagtgcagctggagggctgcttcccggac
acgatgacgaggtgtgctgagctgctcaacgacaacatcgacgtggactttgtggacatc
aactctggttgtcccattgaccttgtgttcaaaaagggtggaggctgtggtctgatgatg
aggaccaacaaatttgaacagattgtcaggggaatgaactcggttcttgatgtcccatta
acagtcaagattcgcacgggcgtccaagaaaagaccaacatcgcacacaagctgatccct
gagctgaaaaagtggggtgcatcactaataacgttacatggtagatcccgggaacagcgt
tacaccaaatcagcagactgggattatattgacacttgctcaaagttggctagtcccatt
ccactcttcggtaatggagatattctgtcctgggaagatgcaatgaaggctagagaaact
ggagtttccgggctaatggtggcaagaggtgctctgataaaaccctggatcttcacggag
atcaaggagaagaggcactgggacatcacctccagtgagcgcttggacgtcctgcgggat
ttcacacacttcggcatggagcactggggaagtgatacacagggcctggagaagaccaga
acttttctgctggaatggctgtcattcttgtgcagatacatccctgtgggattgttggaa
agagtgcctcaaaagattaacgaacgaccaccgttctatatgggcagagactacttggag
tctctcatggccagtcactatgtggaagactgggtgaaaatcagtgagttgttgctgggg
cctgtcccgaagaacttcagtttccttcccaaacacaaagccaatgcttacaagtaa

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