KEGG   Clupea harengus (Atlantic herring): 105905009
Entry
105905009         CDS       T09045                                 
Symbol
cldnj
Name
(RefSeq) claudin j
  KO
K06087  claudin
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03272  Virion - Hepatitis viruses
char04382  Cornified envelope formation
char04514  Cell adhesion molecules
char04530  Tight junction
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    105905009 (cldnj)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    105905009 (cldnj)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    105905009 (cldnj)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    105905009 (cldnj)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:char03037]
    105905009 (cldnj)
   04147 Exosome [BR:char04147]
    105905009 (cldnj)
   04515 Cell adhesion molecules [BR:char04515]
    105905009 (cldnj)
Cilium and associated proteins [BR:char03037]
 Other cilia and associated proteins
  Stereociliary proteins
   105905009 (cldnj)
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   105905009 (cldnj)
  Exosomal proteins of colorectal cancer cells
   105905009 (cldnj)
Cell adhesion molecules [BR:char04515]
 Immunoglobulin superfamily
  L1 family
   105905009 (cldnj)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 DUF7139 DUF7470
Other DBs
NCBI-GeneID: 105905009
NCBI-ProteinID: XP_012688434
UniProt: A0A6P3W3V2
LinkDB
Position
9:complement(27433116..27434261)
AA seq 240 aa
MALQVLGITLSMMGLAGTILICALPMWKVTAFIGTNIVVAQVFWEGLWLNCVYERTGQMQ
CKLYDALLDLDPDLQAARGLVVVAMALACLAFVLFLAGAECTNCLSHPRAKARIVVASGV
TFVLAGLTVVAPVSWTAHSIIRDFHSPMVHEALKREMGAALYLGWVTAGLLVVGGGVLCT
SCPPERAASASASASASASASAPSPRYMQAQTGTHCSYAIKNYNYAIKNYVWLYAIKNYV
NT seq 723 nt   +upstreamnt  +downstreamnt
atggctctgcaggtgctgggcatcacgctatccatgatgggcctggctggcaccatcctg
atctgtgcgctgcccatgtggaaggtcacggccttcatcggcaccaacatcgtggtggcg
caggtcttctgggagggcctgtggctgaactgcgtgtacgagcgcacgggccagatgcag
tgcaagctctacgacgcgctgctggacctggacccggacctgcaggcggcccgcgggctc
gtggtcgtcgccatggcgctggcctgcctggcgtttgtcctgttcctcgcgggggcggag
tgcaccaactgcttgagccacccgcgggccaaggcgcgcatcgtggtggcgtcgggcgtc
accttcgtgctggcaggtctgacggtcgtggcgcccgtgtcctggaccgcacactccatc
atcagggacttccacagccccatggtgcacgaggcgctgaagagggagatgggggcggcc
ctctacctgggctgggtgacggcggggctcctggtggtggggggaggggtgctgtgtacc
agctgcccaccagagagggccgcctccgcctccgcctccgcctccgcctccgcctccgcc
tccgccccctccccccgctacatgcaggcccagacgggcactcactgcagctacgccatc
aagaactacaactacgccatcaagaactacgtctggctctacgccatcaagaactacgtc
tga

DBGET integrated database retrieval system