Clupea harengus (Atlantic herring): 105905009
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Entry
105905009 CDS
T09045
Symbol
cldnj
Name
(RefSeq) claudin j
KO
K06087
claudin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03272
Virion - Hepatitis viruses
char04382
Cornified envelope formation
char04514
Cell adhesion molecules
char04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
105905009 (cldnj)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105905009 (cldnj)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105905009 (cldnj)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
105905009 (cldnj)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
105905009 (cldnj)
04147 Exosome [BR:
char04147
]
105905009 (cldnj)
04515 Cell adhesion molecules [BR:
char04515
]
105905009 (cldnj)
Cilium and associated proteins [BR:
char03037
]
Other cilia and associated proteins
Stereociliary proteins
105905009 (cldnj)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
105905009 (cldnj)
Exosomal proteins of colorectal cancer cells
105905009 (cldnj)
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
L1 family
105905009 (cldnj)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF7139
DUF7470
Motif
Other DBs
NCBI-GeneID:
105905009
NCBI-ProteinID:
XP_012688434
UniProt:
A0A6P3W3V2
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All DBs
Position
9:complement(27433116..27434261)
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AA seq
240 aa
AA seq
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MALQVLGITLSMMGLAGTILICALPMWKVTAFIGTNIVVAQVFWEGLWLNCVYERTGQMQ
CKLYDALLDLDPDLQAARGLVVVAMALACLAFVLFLAGAECTNCLSHPRAKARIVVASGV
TFVLAGLTVVAPVSWTAHSIIRDFHSPMVHEALKREMGAALYLGWVTAGLLVVGGGVLCT
SCPPERAASASASASASASASAPSPRYMQAQTGTHCSYAIKNYNYAIKNYVWLYAIKNYV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggctctgcaggtgctgggcatcacgctatccatgatgggcctggctggcaccatcctg
atctgtgcgctgcccatgtggaaggtcacggccttcatcggcaccaacatcgtggtggcg
caggtcttctgggagggcctgtggctgaactgcgtgtacgagcgcacgggccagatgcag
tgcaagctctacgacgcgctgctggacctggacccggacctgcaggcggcccgcgggctc
gtggtcgtcgccatggcgctggcctgcctggcgtttgtcctgttcctcgcgggggcggag
tgcaccaactgcttgagccacccgcgggccaaggcgcgcatcgtggtggcgtcgggcgtc
accttcgtgctggcaggtctgacggtcgtggcgcccgtgtcctggaccgcacactccatc
atcagggacttccacagccccatggtgcacgaggcgctgaagagggagatgggggcggcc
ctctacctgggctgggtgacggcggggctcctggtggtggggggaggggtgctgtgtacc
agctgcccaccagagagggccgcctccgcctccgcctccgcctccgcctccgcctccgcc
tccgccccctccccccgctacatgcaggcccagacgggcactcactgcagctacgccatc
aagaactacaactacgccatcaagaactacgtctggctctacgccatcaagaactacgtc
tga
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