Clupea harengus (Atlantic herring): 105905021
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Entry
105905021 CDS
T09045
Symbol
taf15
Name
(RefSeq) TATA-binding protein-associated factor 2N isoform X1
KO
K13098
RNA-binding protein FUS
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03015
mRNA surveillance pathway
char03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105905021 (taf15)
09122 Translation
03015 mRNA surveillance pathway
105905021 (taf15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105905021 (taf15)
Spliceosome [BR:
char03041
]
Complex A
Other components
Complex A specific factors
105905021 (taf15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
105905021
NCBI-ProteinID:
XP_031429881
Ensembl:
ENSCHAG00000013444
UniProt:
A0A6P8G2A4
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All DBs
Position
9:complement(27357466..27366146)
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AA seq
468 aa
AA seq
DB search
MASDSGYGQPGAQQSYGSYGSQGYQQSGQQGYGQGNGAASYGGQSYAGYGQTEGFGQQSQ
GYSSGGYGQQQPPPPPPQQPSYDSYGQQGTDPPAGFSDKSSYGQPASGGYSQPSAGGAYG
QPSGGSYGQPSATSYGQSGAGAGYGQQSGGYGQSHGRRTEGESRRYGDDSGSDRSEGYRG
RGRGGYDRGGYDRGGYDRGGRGGPPSGMGGGDRGGFKNYGGPRDYGQREDSGGDNSDNSD
NNTIFVQGLGEDVTVQEVADYFKQIGIIKLNKKTGQPMINLYTDKATGKLKGEATVSYED
PPSAKAAIDWFDGKEFQGKAIKVSFATRRAEFASGRGAAVGGGGAGGGGRGRGGFRGRGG
FGGGGGGGPSFDVKGGDWPCPNSSCGNMNFARRQECNKCGAPKPGDSYGGDRGGGGGRGG
YGGDRGGGFRGRGGGGGFRGGDRGDRGGGGYKMGGRGEHREDRRDRPY
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagattcgggctacgggcagcctggagctcaacaaagttatggctcttacgga
agtcaaggctatcaacagagtggacagcagggctatggccaagggaatggagctgcctct
tatggtggacagagctatgctggttatggtcagaccgaagggtttggccaacagtcccag
ggttactcctcaggaggctatgggcaacagcagccccctccgccaccaccacagcagcca
agctacgactcctacgggcaacagggcaccgaccccccggccgggttcagtgacaagtcc
tcttacgggcagccggccagtggaggctatagtcaaccgtcggccgggggggcctatggc
cagccgtcaggaggcagctacgggcaaccgtctgccaccagctatggtcaatctggagca
ggagcaggctatggccaacagtcaggtggttatggccaatctcatggaaggaggaccgag
ggtgagagcagacggtacggggacgacagtggttccgaccgctctgaaggctaccggggg
aggggccgtggtggctacgatcgcggcggttacgaccgcggaggctacgaccgcggcgga
agaggtggccccccttctggtatgggaggtggtgaccgtggtggcttcaaaaattacggt
ggaccccgagactacggccaacgggaagactctggtggagacaactcggacaactctgac
aacaacaccatctttgttcaaggcctgggagaagacgtcaccgttcaggaagtggccgac
tacttcaagcagataggcatcatcaagttgaataagaagacgggccagcctatgatcaac
ctctacacagacaaggccacaggaaagctgaaaggagaagccaccgtctcttatgaagac
ccaccctctgccaaagctgccattgactggtttgacggaaaggagttccaaggtaaagcc
atcaaggtctcgtttgccacccgaagggcagaatttgcatctggccgaggagctgcggtg
ggtggcggcggcgccggtggaggtggcaggggacgtggagggttcagaggtcgcggtggc
ttcggtggtggcggcggcggcggacccagctttgacgtgaaaggtggagactggccctgt
cccaacagctcctgcggcaacatgaacttcgctcgtcgtcaggagtgcaacaagtgtggc
gcacccaagcctggagacagctacggaggagaccgaggaggtggcggtggcaggggaggc
tacggcggtgatcgtggcggaggcttcaggggccgcggcggtggcggtggcttccggggc
ggagaccgtggagatcgcggcggtggcggctacaaaatgggaggaaggggagagcacagg
gaagacagaagagaccggccatactaa
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integrated database retrieval system
