Clupea harengus (Atlantic herring): 105905030
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Entry
105905030 CDS
T09045
Symbol
gabrb1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04080
Neuroactive ligand-receptor interaction
char04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105905030 (gabrb1)
04082 Neuroactive ligand signaling
105905030 (gabrb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105905030 (gabrb1)
Ion channels [BR:
char04040
]
Ligand-gated channels
GABA-A
105905030 (gabrb1)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
105905030
NCBI-ProteinID:
XP_012688457
Ensembl:
ENSCHAG00000014126
UniProt:
A0A6P3W3C5
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Position
14:complement(6686325..6727891)
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AA seq
478 aa
AA seq
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MWTTRDRWRTGILSLPVLVTMVLGAQSPSEPSNMSYVKVTVDKLLKGYDIRLRPDFGGPP
VDVIMSIDISSIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADQLWVPD
TYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWQAGKSVRGVSNIELPQFSIIDYQTISKKAVFATGSYPRLSLSFKLKR
NIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIP
YVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKKAENLAKSTNEKQQRMDANK
VQVDAHGNIHLANMDLRNEMTGVEMLGGLGGTNTMFSYDSASIQYRKPMTGRDLYGRPTP
SLERPIGPKKSRLRRRASQLKVKIPDLTDVNAIDKWSRVIFPCFFSFFNLVYWLYYAG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgactcgagaccgctggcgcacggggattctctctctcccggtgctagtcacc
atggttctgggcgcgcagagcccgagcgaacctagcaacatgtcatacgtcaaagtcacc
gtggataaactgctgaaaggctacgacatacgactgaggccagactttggaggtcctcct
gttgacgtcatcatgagcattgacatctccagcattgatatggtatcagaagtaaacatg
gactacaccatcaccatgtatttccagcagtcatggcgggacaagcggttgtcctacacg
gggattcctctcaacctgacacttgacaaccgcgtggctgaccagctctgggtacctgac
acctacttcataaacgacaagaaatccttcgttcacggagtcactgtcaagaaccgcatg
attcgactgcacccggacggaactgtcttgtatggactcaggatcaccaccactgccgcc
tgtatgatggacctgcgcagataccccctggacgaacagaactgcaccttggagattgag
agctacggctacaccacggacgacatcgagttttactggcaggctggcaaatcggtgagg
ggcgtgagcaacatcgagctgcctcagttctccatcatcgactaccaaacaatttcgaag
aaagccgtgtttgccacaggctcatacccccgtttgtctctgagttttaagctgaagagg
aacatcggctacttcatcctgcagacttacatgccctccaccctgatcaccatcctgtcc
tgggtctccttctggatcaactacgacgcctcagctgctcgagtggctttagggatcact
actgtgctgactatgaccaccatcaacacccatttgcgcgagacactgcccaagatcccg
tacgtgaaggccatcgacatctacctgatgggctgcttcgtgttcgtgttcctggcgctg
ctggagtacgccttcgtcaactacatcttcttcggccgaggcccgcacctgcagaagaag
aaggccgagaacttggccaagagcaccaacgagaagcagcagcgcatggacgccaacaaa
gtccaggtcgacgctcatgggaacatccacctggccaacatggacctgaggaacgagatg
actggggtggagatgctgggtggcctgggaggcaccaacaccatgttctcctacgacagc
gccagcatccagtaccgcaagccgatgacgggccgcgacctctacggccggcccacgccg
tcgctggagcggccgatcgggcccaagaagagccgcctgaggcgccgggcttcgcagctc
aaggtgaagatccccgacctgacggacgtcaacgccattgacaagtggtcgcgcgtcatc
ttcccgtgcttcttcagcttcttcaacctggtctactggctatactacgctggttaa
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