Clupea harengus (Atlantic herring): 105905042
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Entry
105905042 CDS
T09045
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105905042 (scfd1)
Membrane trafficking [BR:
char04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
105905042 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
105905042 (scfd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Peptidase_S66
Motif
Other DBs
NCBI-GeneID:
105905042
NCBI-ProteinID:
XP_031436478
Ensembl:
ENSCHAG00000011830
UniProt:
A0A6P8GAZ8
LinkDB
All DBs
Position
14
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AA seq
632 aa
AA seq
DB search
MAASVREKQTAALKRMLNLNAPLLKNTAAEPVWKVLVYDRFGQDIISPLLSVKELRDMGV
TLHLLLHSDRDPIPDVPAIYFVMPSEENIDRICQDLRNQLHETYYLNFISAISRSKLEDI
ASAALTANATTQITKVFDQYLNFITLEDDMFILCNQTKEMISYHAINKPDIMDTDMETIM
DTIVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDNMGSGQ
FSFQRPLFVLVDRNLDLATPLHHTWTYQALIHDVLDFHLNRVNIEEASGTEASPAGARPK
KKNKKSYDLTAADKFWQKHKGSPFPEVAESVQEELDTYRAQEDEVKRLKSIMGLEGEDEG
AISMLSDNTAKLTSAMSSLPELLEKKRLIDLHTNVATAVLDHIKSRKLDVYFEYEEKLMS
KSTLDKSLLDIISDPDAGTPEDKMRLFLIFYITAPMPPSEADVEQYKKALLDAGCDLSPL
NYIKQWKAFTKMAATPANYGNSGVKPMGLFSRVMNTGSQFVMEGVKNLVLKQHNLPVTRI
LDNLMEMKSNPETDDYRYFDPKMLRGNDSSIPRNKNPFQEAIVFVVGGGNYIEYQNLVDY
TKARQGKRVFYGCSELFNAAQFLKQLSELGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccgtacgggagaaacagacagctgccttgaagcggatgttaaacctgaac
gcccctctcttgaaaaacacagcagccgaaccagtatggaaggttttggtctacgaccgc
tttgggcaagacatcatctcccctttgctgtctgtgaaagagctgagagacatgggggtc
accctacacctgctgctgcattcagatcgtgacccaatcccagatgtcccagccatctac
tttgttatgccctcagaggagaacattgacaggatatgccaagacctgcggaaccagctc
catgagacctactacctgaacttcatctcggccatctccaggagtaagctggaggacata
gccagcgctgccttgactgcaaacgccaccacccagataaccaaggtatttgaccagtat
ttgaacttcatcaccctggaagatgacatgtttatcctgtgcaatcagaccaaggagatg
atctcctaccatgcgattaacaagccagacataatggacacagacatggagactataatg
gacaccattgtggacagtctcttctgcttctttgtgacactaggtgcggtgcctatcatc
cgatgcccgcgaggaaatgccgctgaaatggtagccgtgaaactggataagaagctgcgg
gagaatctgcgagatgccagaaacagcctgttcaccggagacaacatgggctccggccag
ttcagtttccagaggcctttgttcgtccttgtggaccgtaacctggacctggccacccca
cttcatcacacatggacctaccaagccctcatccatgatgtactggacttccacctaaac
agagtgaacattgaagaggcgtcaggtacagaggcctcccccgccggggcccgacccaag
aagaagaacaagaagagttacgacctcacggccgcagacaagttctggcagaaacacaag
ggcagtccattcccggaggtggcggagtccgtgcaggaggagctggacacgtatcgagcc
caggaggatgaggtcaagcggctgaagagcatcatggggctggagggggaagacgagggc
gccatcagcatgctgtccgataacacggccaaactcacctcggccatgagttccctccca
gagctcctggagaagaagaggttaatcgaccttcataccaacgtggccacagcggtgctt
gaccacatcaagtcacgtaaactggatgtttacttcgagtacgaggagaagctgatgagc
aaatcaacattggacaagtccctgttggacattatcagcgacccggacgcgggaacgcca
gaggacaagatgagactgttcctgatcttctacatcaccgcgccgatgcccccatcagag
gccgatgtggagcagtacaagaaggccctgctggatgccggctgtgacctctcgcccctc
aactacatcaaacagtggaaagctttcaccaagatggctgccacaccagctaactatggg
aacagtggagtaaaacctatgggtctcttctctcgtgtgatgaacacaggctcccagttt
gtgatggagggagtgaagaacctggtgctgaagcagcacaatcttcccgtcactcgaatc
ctggacaacctcatggagatgaagtctaacccagagacggacgactaccgctacttcgac
ccaaagatgctgcgaggcaacgacagttccattccaagaaacaagaacccatttcaggag
gctattgtctttgtggttggcggaggcaattacattgagtatcaaaatcttgttgattac
acgaaggccaggcagggaaagcgtgtcttctacggctgtagtgagcttttcaacgccgct
caattcctcaaacagctctccgagctcggacagaaataa
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